Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Col7a1Q63870 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col7a1Q63870 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.63■□□□□ 0.09
Col7a1Q63870 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Col7a1Q63870 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col7a1Q63870 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col7a1Q63870 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col7a1Q63870 Gm37935-201ENSMUST00000192012 982 ntBASIC15.63■□□□□ 0.09
Col7a1Q63870 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col7a1Q63870 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col7a1Q63870 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col7a1Q63870 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col7a1Q63870 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col7a1Q63870 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Col7a1Q63870 Gm10138-203ENSMUST00000206952 366 ntBASIC15.62■□□□□ 0.09
Col7a1Q63870 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.62■□□□□ 0.09
Col7a1Q63870 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col7a1Q63870 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col7a1Q63870 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col7a1Q63870 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Col7a1Q63870 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Col7a1Q63870 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col7a1Q63870 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col7a1Q63870 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col7a1Q63870 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Col7a1Q63870 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Col7a1Q63870 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Col7a1Q63870 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col7a1Q63870 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col7a1Q63870 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col7a1Q63870 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col7a1Q63870 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col7a1Q63870 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col7a1Q63870 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col7a1Q63870 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.61■□□□□ 0.09
Col7a1Q63870 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.61■□□□□ 0.09
Col7a1Q63870 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.61■□□□□ 0.09
Col7a1Q63870 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col7a1Q63870 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col7a1Q63870 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col7a1Q63870 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Col7a1Q63870 Gm5587-201ENSMUST00000206270 674 ntBASIC15.61■□□□□ 0.09
Col7a1Q63870 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.61■□□□□ 0.09
Col7a1Q63870 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col7a1Q63870 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Col7a1Q63870 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Col7a1Q63870 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col7a1Q63870 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Col7a1Q63870 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col7a1Q63870 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col7a1Q63870 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col7a1Q63870 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col7a1Q63870 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Col7a1Q63870 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.59■□□□□ 0.09
Col7a1Q63870 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Col7a1Q63870 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Col7a1Q63870 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Col7a1Q63870 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Col7a1Q63870 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col7a1Q63870 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col7a1Q63870 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col7a1Q63870 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.59■□□□□ 0.09
Col7a1Q63870 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col7a1Q63870 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Col7a1Q63870 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col7a1Q63870 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col7a1Q63870 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col7a1Q63870 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.59■□□□□ 0.09
Col7a1Q63870 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col7a1Q63870 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Col7a1Q63870 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.58■□□□□ 0.09
Col7a1Q63870 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.58■□□□□ 0.09
Col7a1Q63870 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col7a1Q63870 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col7a1Q63870 Gm29518-201ENSMUST00000190858 372 ntBASIC15.58■□□□□ 0.08
Col7a1Q63870 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col7a1Q63870 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col7a1Q63870 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col7a1Q63870 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col7a1Q63870 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col7a1Q63870 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.58■□□□□ 0.08
Col7a1Q63870 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Col7a1Q63870 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col7a1Q63870 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col7a1Q63870 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col7a1Q63870 Gm18958-201ENSMUST00000174258 762 ntBASIC15.57■□□□□ 0.08
Col7a1Q63870 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Col7a1Q63870 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col7a1Q63870 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col7a1Q63870 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col7a1Q63870 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col7a1Q63870 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col7a1Q63870 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.57■□□□□ 0.08
Col7a1Q63870 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.57■□□□□ 0.08
Col7a1Q63870 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col7a1Q63870 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col7a1Q63870 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col7a1Q63870 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col7a1Q63870 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col7a1Q63870 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms