Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.17■□□□□ 0.5
Six3Q62233 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six3Q62233 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six3Q62233 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.17■□□□□ 0.5
Six3Q62233 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six3Q62233 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six3Q62233 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six3Q62233 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six3Q62233 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six3Q62233 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six3Q62233 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.17■□□□□ 0.5
Six3Q62233 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six3Q62233 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Six3Q62233 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Six3Q62233 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six3Q62233 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Six3Q62233 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six3Q62233 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six3Q62233 Rarb-207ENSMUST00000225921 2756 ntBASIC18.16■□□□□ 0.5
Six3Q62233 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.16■□□□□ 0.5
Six3Q62233 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.16■□□□□ 0.5
Six3Q62233 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six3Q62233 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six3Q62233 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six3Q62233 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six3Q62233 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six3Q62233 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six3Q62233 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Six3Q62233 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six3Q62233 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.15■□□□□ 0.5
Six3Q62233 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.15■□□□□ 0.5
Six3Q62233 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Six3Q62233 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six3Q62233 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Six3Q62233 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six3Q62233 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Six3Q62233 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Six3Q62233 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six3Q62233 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six3Q62233 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Six3Q62233 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Six3Q62233 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six3Q62233 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six3Q62233 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Six3Q62233 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.14■□□□□ 0.49
Six3Q62233 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.14■□□□□ 0.49
Six3Q62233 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Six3Q62233 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six3Q62233 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six3Q62233 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.14■□□□□ 0.49
Six3Q62233 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six3Q62233 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six3Q62233 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six3Q62233 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six3Q62233 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Six3Q62233 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six3Q62233 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six3Q62233 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.13■□□□□ 0.49
Six3Q62233 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six3Q62233 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six3Q62233 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Six3Q62233 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Six3Q62233 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Six3Q62233 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six3Q62233 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Six3Q62233 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.13■□□□□ 0.49
Six3Q62233 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Six3Q62233 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Six3Q62233 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six3Q62233 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Six3Q62233 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six3Q62233 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Six3Q62233 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six3Q62233 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Six3Q62233 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.12■□□□□ 0.49
Six3Q62233 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six3Q62233 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six3Q62233 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Six3Q62233 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six3Q62233 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six3Q62233 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.12■□□□□ 0.49
Six3Q62233 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Six3Q62233 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.12■□□□□ 0.49
Six3Q62233 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six3Q62233 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Six3Q62233 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Six3Q62233 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six3Q62233 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six3Q62233 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Six3Q62233 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six3Q62233 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six3Q62233 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Six3Q62233 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six3Q62233 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six3Q62233 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six3Q62233 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six3Q62233 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six3Q62233 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six3Q62233 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.11■□□□□ 0.49
Six3Q62233 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms