Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.44■□□□□ 0.38
Sox17Q61473 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.44■□□□□ 0.38
Sox17Q61473 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sox17Q61473 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.43■□□□□ 0.38
Sox17Q61473 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sox17Q61473 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.43■□□□□ 0.38
Sox17Q61473 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Sox17Q61473 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox17Q61473 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox17Q61473 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox17Q61473 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox17Q61473 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox17Q61473 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.42■□□□□ 0.38
Sox17Q61473 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox17Q61473 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Sox17Q61473 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox17Q61473 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox17Q61473 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sox17Q61473 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox17Q61473 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sox17Q61473 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.42■□□□□ 0.38
Sox17Q61473 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox17Q61473 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox17Q61473 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox17Q61473 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox17Q61473 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Sox17Q61473 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox17Q61473 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox17Q61473 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Sox17Q61473 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox17Q61473 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox17Q61473 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox17Q61473 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox17Q61473 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox17Q61473 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox17Q61473 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.41■□□□□ 0.38
Sox17Q61473 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sox17Q61473 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox17Q61473 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sox17Q61473 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox17Q61473 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox17Q61473 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox17Q61473 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.4■□□□□ 0.38
Sox17Q61473 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox17Q61473 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.4■□□□□ 0.38
Sox17Q61473 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.4■□□□□ 0.38
Sox17Q61473 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.4■□□□□ 0.38
Sox17Q61473 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox17Q61473 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox17Q61473 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox17Q61473 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.4■□□□□ 0.38
Sox17Q61473 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox17Q61473 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox17Q61473 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox17Q61473 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox17Q61473 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox17Q61473 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox17Q61473 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sox17Q61473 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox17Q61473 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox17Q61473 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox17Q61473 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox17Q61473 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox17Q61473 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Sox17Q61473 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox17Q61473 Gm9959-201ENSMUST00000068277 390 ntBASIC17.39■□□□□ 0.37
Sox17Q61473 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox17Q61473 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox17Q61473 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox17Q61473 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox17Q61473 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox17Q61473 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.39■□□□□ 0.37
Sox17Q61473 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox17Q61473 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox17Q61473 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox17Q61473 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox17Q61473 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox17Q61473 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sox17Q61473 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox17Q61473 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox17Q61473 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.38■□□□□ 0.37
Sox17Q61473 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox17Q61473 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox17Q61473 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sox17Q61473 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox17Q61473 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox17Q61473 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms