Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hif1aQ61221 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hif1aQ61221 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.75■□□□□ 0.59
Hif1aQ61221 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.75■□□□□ 0.59
Hif1aQ61221 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hif1aQ61221 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hif1aQ61221 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Hif1aQ61221 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hif1aQ61221 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hif1aQ61221 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hif1aQ61221 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hif1aQ61221 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hif1aQ61221 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.74■□□□□ 0.59
Hif1aQ61221 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Hif1aQ61221 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hif1aQ61221 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hif1aQ61221 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hif1aQ61221 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Hif1aQ61221 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hif1aQ61221 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hif1aQ61221 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.74■□□□□ 0.59
Hif1aQ61221 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.74■□□□□ 0.59
Hif1aQ61221 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Hif1aQ61221 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Hif1aQ61221 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hif1aQ61221 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Hif1aQ61221 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Hif1aQ61221 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hif1aQ61221 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hif1aQ61221 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hif1aQ61221 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hif1aQ61221 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.73■□□□□ 0.59
Hif1aQ61221 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hif1aQ61221 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hif1aQ61221 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hif1aQ61221 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hif1aQ61221 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hif1aQ61221 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hif1aQ61221 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hif1aQ61221 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.73■□□□□ 0.59
Hif1aQ61221 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hif1aQ61221 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Hif1aQ61221 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hif1aQ61221 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hif1aQ61221 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hif1aQ61221 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hif1aQ61221 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hif1aQ61221 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hif1aQ61221 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.72■□□□□ 0.59
Hif1aQ61221 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hif1aQ61221 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hif1aQ61221 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hif1aQ61221 Gm7860-201ENSMUST00000121190 879 ntBASIC18.72■□□□□ 0.59
Hif1aQ61221 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.72■□□□□ 0.59
Hif1aQ61221 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hif1aQ61221 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hif1aQ61221 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hif1aQ61221 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hif1aQ61221 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hif1aQ61221 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.72■□□□□ 0.59
Hif1aQ61221 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hif1aQ61221 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hif1aQ61221 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hif1aQ61221 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hif1aQ61221 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hif1aQ61221 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hif1aQ61221 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Hif1aQ61221 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Hif1aQ61221 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hif1aQ61221 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Hif1aQ61221 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hif1aQ61221 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hif1aQ61221 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hif1aQ61221 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hif1aQ61221 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hif1aQ61221 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hif1aQ61221 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hif1aQ61221 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hif1aQ61221 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hif1aQ61221 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hif1aQ61221 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hif1aQ61221 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Hif1aQ61221 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.7■□□□□ 0.58
Hif1aQ61221 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hif1aQ61221 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.7■□□□□ 0.58
Hif1aQ61221 Gm43137-201ENSMUST00000198052 594 ntBASIC18.7■□□□□ 0.58
Hif1aQ61221 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.7■□□□□ 0.58
Hif1aQ61221 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.7■□□□□ 0.58
Hif1aQ61221 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hif1aQ61221 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Hif1aQ61221 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hif1aQ61221 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hif1aQ61221 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.7■□□□□ 0.58
Hif1aQ61221 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hif1aQ61221 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hif1aQ61221 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Hif1aQ61221 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hif1aQ61221 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hif1aQ61221 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Hif1aQ61221 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms