Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm12382-201ENSMUST00000122005 922 ntBASIC27.17■■□□□ 1.94
Ptch1Q61115 AC159205.6-201ENSMUST00000224935 887 ntBASIC27.17■■□□□ 1.94
Ptch1Q61115 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ptch1Q61115 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ptch1Q61115 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ptch1Q61115 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC27.17■■□□□ 1.94
Ptch1Q61115 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC27.17■■□□□ 1.94
Ptch1Q61115 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Ptch1Q61115 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ptch1Q61115 Ank2-226ENSMUST00000189368 339 ntBASIC27.16■■□□□ 1.94
Ptch1Q61115 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Ptch1Q61115 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ptch1Q61115 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Ptch1Q61115 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC27.16■■□□□ 1.94
Ptch1Q61115 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ptch1Q61115 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ptch1Q61115 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC27.15■■□□□ 1.94
Ptch1Q61115 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ptch1Q61115 Gm9103-201ENSMUST00000119371 405 ntBASIC27.15■■□□□ 1.94
Ptch1Q61115 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC27.15■■□□□ 1.94
Ptch1Q61115 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Ptch1Q61115 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC27.15■■□□□ 1.94
Ptch1Q61115 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Ptch1Q61115 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Ptch1Q61115 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
Ptch1Q61115 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ptch1Q61115 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ptch1Q61115 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ptch1Q61115 Gm37352-201ENSMUST00000193908 2181 ntBASIC27.14■■□□□ 1.93
Ptch1Q61115 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC27.14■■□□□ 1.93
Ptch1Q61115 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC27.14■■□□□ 1.93
Ptch1Q61115 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ptch1Q61115 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ptch1Q61115 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Ptch1Q61115 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Ptch1Q61115 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ptch1Q61115 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC27.13■■□□□ 1.93
Ptch1Q61115 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Ptch1Q61115 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ptch1Q61115 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Ptch1Q61115 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ptch1Q61115 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ptch1Q61115 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ptch1Q61115 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Ptch1Q61115 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ptch1Q61115 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Ptch1Q61115 Gm8309-201ENSMUST00000206627 1448 ntBASIC27.11■■□□□ 1.93
Ptch1Q61115 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ptch1Q61115 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC27.11■■□□□ 1.93
Ptch1Q61115 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC27.11■■□□□ 1.93
Ptch1Q61115 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ptch1Q61115 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ptch1Q61115 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ptch1Q61115 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ptch1Q61115 Gm45640-201ENSMUST00000210665 1896 ntBASIC27.11■■□□□ 1.93
Ptch1Q61115 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ptch1Q61115 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ptch1Q61115 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ptch1Q61115 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
Ptch1Q61115 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC27.1■■□□□ 1.93
Ptch1Q61115 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Ptch1Q61115 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Ptch1Q61115 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Ptch1Q61115 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Ptch1Q61115 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ptch1Q61115 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC27.09■■□□□ 1.93
Ptch1Q61115 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
Ptch1Q61115 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC27.09■■□□□ 1.93
Ptch1Q61115 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Ptch1Q61115 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ptch1Q61115 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC27.09■■□□□ 1.93
Ptch1Q61115 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ptch1Q61115 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ptch1Q61115 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ptch1Q61115 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC27.08■■□□□ 1.93
Ptch1Q61115 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ptch1Q61115 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Ptch1Q61115 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Ptch1Q61115 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Ptch1Q61115 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
Ptch1Q61115 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ptch1Q61115 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ptch1Q61115 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC27.07■■□□□ 1.92
Ptch1Q61115 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ptch1Q61115 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ptch1Q61115 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Ptch1Q61115 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC27.07■■□□□ 1.92
Ptch1Q61115 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ptch1Q61115 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ptch1Q61115 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ptch1Q61115 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ptch1Q61115 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Ptch1Q61115 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Ptch1Q61115 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Ptch1Q61115 Gm38285-201ENSMUST00000192928 922 ntBASIC27.07■■□□□ 1.92
Ptch1Q61115 Gm45058-201ENSMUST00000205810 766 ntBASIC27.07■■□□□ 1.92
Ptch1Q61115 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ptch1Q61115 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC27.07■■□□□ 1.92
Ptch1Q61115 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC27.06■■□□□ 1.92
Ptch1Q61115 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms