Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.88■□□□□ 0.61
Sdf4Q61112 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdf4Q61112 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdf4Q61112 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sdf4Q61112 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.88■□□□□ 0.61
Sdf4Q61112 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdf4Q61112 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdf4Q61112 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdf4Q61112 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdf4Q61112 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Sdf4Q61112 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.87■□□□□ 0.61
Sdf4Q61112 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sdf4Q61112 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.87■□□□□ 0.61
Sdf4Q61112 Gm7514-201ENSMUST00000209475 934 ntBASIC18.87■□□□□ 0.61
Sdf4Q61112 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdf4Q61112 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sdf4Q61112 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdf4Q61112 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdf4Q61112 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sdf4Q61112 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.87■□□□□ 0.61
Sdf4Q61112 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdf4Q61112 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdf4Q61112 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdf4Q61112 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdf4Q61112 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sdf4Q61112 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdf4Q61112 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sdf4Q61112 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdf4Q61112 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sdf4Q61112 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.86■□□□□ 0.61
Sdf4Q61112 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Sdf4Q61112 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.86■□□□□ 0.61
Sdf4Q61112 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sdf4Q61112 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sdf4Q61112 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdf4Q61112 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.86■□□□□ 0.61
Sdf4Q61112 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdf4Q61112 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdf4Q61112 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdf4Q61112 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sdf4Q61112 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sdf4Q61112 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sdf4Q61112 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sdf4Q61112 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdf4Q61112 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdf4Q61112 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.85■□□□□ 0.61
Sdf4Q61112 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sdf4Q61112 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdf4Q61112 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdf4Q61112 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdf4Q61112 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.85■□□□□ 0.61
Sdf4Q61112 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdf4Q61112 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdf4Q61112 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdf4Q61112 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sdf4Q61112 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sdf4Q61112 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdf4Q61112 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdf4Q61112 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sdf4Q61112 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Sdf4Q61112 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Sdf4Q61112 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdf4Q61112 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdf4Q61112 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sdf4Q61112 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sdf4Q61112 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdf4Q61112 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sdf4Q61112 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Sdf4Q61112 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Sdf4Q61112 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sdf4Q61112 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sdf4Q61112 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sdf4Q61112 Gm10849-201ENSMUST00000100397 618 ntBASIC18.83■□□□□ 0.6
Sdf4Q61112 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sdf4Q61112 Gm42569-201ENSMUST00000200539 472 ntBASIC18.83■□□□□ 0.6
Sdf4Q61112 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sdf4Q61112 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sdf4Q61112 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sdf4Q61112 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sdf4Q61112 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sdf4Q61112 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdf4Q61112 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdf4Q61112 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdf4Q61112 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sdf4Q61112 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdf4Q61112 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.82■□□□□ 0.6
Sdf4Q61112 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sdf4Q61112 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdf4Q61112 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdf4Q61112 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sdf4Q61112 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.82■□□□□ 0.6
Sdf4Q61112 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdf4Q61112 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sdf4Q61112 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sdf4Q61112 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sdf4Q61112 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.81■□□□□ 0.6
Sdf4Q61112 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sdf4Q61112 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdf4Q61112 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sdf4Q61112 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms