Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a4Q60857 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Slc6a4Q60857 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a4Q60857 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a4Q60857 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.09■□□□□ 0.65
Slc6a4Q60857 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.09■□□□□ 0.65
Slc6a4Q60857 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a4Q60857 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Slc6a4Q60857 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Slc6a4Q60857 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a4Q60857 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Slc6a4Q60857 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc6a4Q60857 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Slc6a4Q60857 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Slc6a4Q60857 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc6a4Q60857 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Slc6a4Q60857 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Slc6a4Q60857 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc6a4Q60857 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Slc6a4Q60857 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc6a4Q60857 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc6a4Q60857 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Slc6a4Q60857 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a4Q60857 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a4Q60857 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a4Q60857 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Slc6a4Q60857 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a4Q60857 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a4Q60857 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.07■□□□□ 0.64
Slc6a4Q60857 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.07■□□□□ 0.64
Slc6a4Q60857 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a4Q60857 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc6a4Q60857 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a4Q60857 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a4Q60857 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a4Q60857 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a4Q60857 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.06■□□□□ 0.64
Slc6a4Q60857 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Slc6a4Q60857 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a4Q60857 Gm20760-201ENSMUST00000179197 648 ntBASIC19.06■□□□□ 0.64
Slc6a4Q60857 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a4Q60857 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a4Q60857 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a4Q60857 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a4Q60857 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc6a4Q60857 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a4Q60857 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a4Q60857 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Slc6a4Q60857 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a4Q60857 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a4Q60857 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a4Q60857 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Slc6a4Q60857 Gm27275-201ENSMUST00000184318 272 ntBASIC19.05■□□□□ 0.64
Slc6a4Q60857 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a4Q60857 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a4Q60857 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc6a4Q60857 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.05■□□□□ 0.64
Slc6a4Q60857 Gm12896-201ENSMUST00000118430 226 ntBASIC19.04■□□□□ 0.64
Slc6a4Q60857 Gm44549-201ENSMUST00000208351 577 ntBASIC19.04■□□□□ 0.64
Slc6a4Q60857 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.04■□□□□ 0.64
Slc6a4Q60857 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a4Q60857 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a4Q60857 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slc6a4Q60857 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a4Q60857 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.03■□□□□ 0.64
Slc6a4Q60857 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a4Q60857 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a4Q60857 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.03■□□□□ 0.64
Slc6a4Q60857 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a4Q60857 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.03■□□□□ 0.64
Slc6a4Q60857 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Slc6a4Q60857 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a4Q60857 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Slc6a4Q60857 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Slc6a4Q60857 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a4Q60857 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a4Q60857 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc6a4Q60857 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Slc6a4Q60857 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Slc6a4Q60857 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a4Q60857 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a4Q60857 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a4Q60857 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a4Q60857 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a4Q60857 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a4Q60857 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a4Q60857 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a4Q60857 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a4Q60857 Trmt13-210ENSMUST00000198454 880 ntBASIC19.02■□□□□ 0.64
Slc6a4Q60857 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a4Q60857 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc6a4Q60857 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Slc6a4Q60857 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc6a4Q60857 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms