Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.52■□□□□ 0.4
Ripk1Q60855 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ripk1Q60855 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ripk1Q60855 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ripk1Q60855 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ripk1Q60855 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ripk1Q60855 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ripk1Q60855 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.51■□□□□ 0.39
Ripk1Q60855 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ripk1Q60855 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.51■□□□□ 0.39
Ripk1Q60855 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ripk1Q60855 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ripk1Q60855 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ripk1Q60855 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.51■□□□□ 0.39
Ripk1Q60855 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ripk1Q60855 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ripk1Q60855 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ripk1Q60855 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ripk1Q60855 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ripk1Q60855 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Ripk1Q60855 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ripk1Q60855 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ripk1Q60855 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.5■□□□□ 0.39
Ripk1Q60855 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ripk1Q60855 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ripk1Q60855 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ripk1Q60855 Reep4-203ENSMUST00000226563 1444 ntBASIC17.5■□□□□ 0.39
Ripk1Q60855 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ripk1Q60855 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.5■□□□□ 0.39
Ripk1Q60855 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ripk1Q60855 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ripk1Q60855 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.5■□□□□ 0.39
Ripk1Q60855 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ripk1Q60855 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ripk1Q60855 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ripk1Q60855 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ripk1Q60855 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ripk1Q60855 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ripk1Q60855 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ripk1Q60855 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ripk1Q60855 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ripk1Q60855 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ripk1Q60855 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ripk1Q60855 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ripk1Q60855 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.49■□□□□ 0.39
Ripk1Q60855 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ripk1Q60855 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ripk1Q60855 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ripk1Q60855 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ripk1Q60855 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ripk1Q60855 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.49■□□□□ 0.39
Ripk1Q60855 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ripk1Q60855 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ripk1Q60855 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.49■□□□□ 0.39
Ripk1Q60855 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.49■□□□□ 0.39
Ripk1Q60855 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ripk1Q60855 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ripk1Q60855 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ripk1Q60855 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ripk1Q60855 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ripk1Q60855 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ripk1Q60855 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Ripk1Q60855 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ripk1Q60855 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ripk1Q60855 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.48■□□□□ 0.39
Ripk1Q60855 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ripk1Q60855 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ripk1Q60855 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Ripk1Q60855 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ripk1Q60855 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ripk1Q60855 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ripk1Q60855 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.48■□□□□ 0.39
Ripk1Q60855 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.48■□□□□ 0.39
Ripk1Q60855 Gm13146-201ENSMUST00000118508 780 ntBASIC17.48■□□□□ 0.39
Ripk1Q60855 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.48■□□□□ 0.39
Ripk1Q60855 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ripk1Q60855 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ripk1Q60855 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ripk1Q60855 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ripk1Q60855 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ripk1Q60855 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Ripk1Q60855 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ripk1Q60855 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ripk1Q60855 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Ripk1Q60855 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ripk1Q60855 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ripk1Q60855 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.47■□□□□ 0.39
Ripk1Q60855 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ripk1Q60855 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ripk1Q60855 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ripk1Q60855 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ripk1Q60855 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
Ripk1Q60855 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ripk1Q60855 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ripk1Q60855 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ripk1Q60855 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ripk1Q60855 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ripk1Q60855 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ripk1Q60855 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ripk1Q60855 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms