Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Tnfaip3Q60769 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Tnfaip3Q60769 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfaip3Q60769 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfaip3Q60769 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Tnfaip3Q60769 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfaip3Q60769 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Tnfaip3Q60769 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfaip3Q60769 Gm12441-201ENSMUST00000121806 588 ntBASIC17.44■□□□□ 0.38
Tnfaip3Q60769 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfaip3Q60769 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfaip3Q60769 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Tnfaip3Q60769 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfaip3Q60769 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfaip3Q60769 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfaip3Q60769 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Tnfaip3Q60769 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfaip3Q60769 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfaip3Q60769 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfaip3Q60769 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.43■□□□□ 0.38
Tnfaip3Q60769 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfaip3Q60769 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfaip3Q60769 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfaip3Q60769 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfaip3Q60769 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Tnfaip3Q60769 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Tnfaip3Q60769 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfaip3Q60769 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfaip3Q60769 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfaip3Q60769 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Tnfaip3Q60769 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.43■□□□□ 0.38
Tnfaip3Q60769 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfaip3Q60769 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfaip3Q60769 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.42■□□□□ 0.38
Tnfaip3Q60769 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfaip3Q60769 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Tnfaip3Q60769 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfaip3Q60769 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfaip3Q60769 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfaip3Q60769 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.41■□□□□ 0.38
Tnfaip3Q60769 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.41■□□□□ 0.38
Tnfaip3Q60769 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfaip3Q60769 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfaip3Q60769 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfaip3Q60769 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tnfaip3Q60769 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.41■□□□□ 0.38
Tnfaip3Q60769 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfaip3Q60769 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfaip3Q60769 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfaip3Q60769 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tnfaip3Q60769 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tnfaip3Q60769 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfaip3Q60769 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfaip3Q60769 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfaip3Q60769 Gm26524-201ENSMUST00000192339 390 ntBASIC17.39■□□□□ 0.37
Tnfaip3Q60769 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.39■□□□□ 0.37
Tnfaip3Q60769 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Tnfaip3Q60769 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Tnfaip3Q60769 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.39■□□□□ 0.37
Tnfaip3Q60769 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfaip3Q60769 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms