Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-3Q5R1C3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav3-3Q5R1C3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav3-3Q5R1C3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-3Q5R1C3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-3Q5R1C3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav3-3Q5R1C3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav3-3Q5R1C3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav3-3Q5R1C3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav3-3Q5R1C3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav3-3Q5R1C3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trav3-3Q5R1C3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-3Q5R1C3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav3-3Q5R1C3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-3Q5R1C3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-3Q5R1C3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-3Q5R1C3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav3-3Q5R1C3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-3Q5R1C3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-3Q5R1C3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-3Q5R1C3 Gm10399-202ENSMUST00000202768 748 ntBASIC13.93□□□□□ -0.18
Trav3-3Q5R1C3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.93□□□□□ -0.18
Trav3-3Q5R1C3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-3Q5R1C3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Trav3-3Q5R1C3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-3Q5R1C3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-3Q5R1C3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-3Q5R1C3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-3Q5R1C3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-3Q5R1C3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 Gm43566-201ENSMUST00000196851 808 ntBASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms