Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav8d-2Q5R1B6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav8d-2Q5R1B6 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.22■□□□□ 0.51
Trav8d-2Q5R1B6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8d-2Q5R1B6 Mtag2-201ENSMUST00000058665 714 ntBASIC18.22■□□□□ 0.51
Trav8d-2Q5R1B6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8d-2Q5R1B6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav8d-2Q5R1B6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav8d-2Q5R1B6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav8d-2Q5R1B6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav8d-2Q5R1B6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav8d-2Q5R1B6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav8d-2Q5R1B6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trav8d-2Q5R1B6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav8d-2Q5R1B6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.21■□□□□ 0.51
Trav8d-2Q5R1B6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav8d-2Q5R1B6 Zfp783-201ENSMUST00000095946 670 ntBASIC18.21■□□□□ 0.51
Trav8d-2Q5R1B6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trav8d-2Q5R1B6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav8d-2Q5R1B6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8d-2Q5R1B6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.2■□□□□ 0.5
Trav8d-2Q5R1B6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8d-2Q5R1B6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8d-2Q5R1B6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8d-2Q5R1B6 Gm13559-201ENSMUST00000120476 863 ntBASIC18.2■□□□□ 0.5
Trav8d-2Q5R1B6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.2■□□□□ 0.5
Trav8d-2Q5R1B6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.2■□□□□ 0.5
Trav8d-2Q5R1B6 Odf3b-204ENSMUST00000227834 930 ntBASIC18.2■□□□□ 0.5
Trav8d-2Q5R1B6 Gm7367-201ENSMUST00000057611 492 ntBASIC18.2■□□□□ 0.5
Trav8d-2Q5R1B6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8d-2Q5R1B6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8d-2Q5R1B6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8d-2Q5R1B6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trav8d-2Q5R1B6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8d-2Q5R1B6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8d-2Q5R1B6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trav8d-2Q5R1B6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8d-2Q5R1B6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trav8d-2Q5R1B6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8d-2Q5R1B6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8d-2Q5R1B6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8d-2Q5R1B6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8d-2Q5R1B6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8d-2Q5R1B6 Gm18025-201ENSMUST00000221733 862 ntBASIC18.19■□□□□ 0.5
Trav8d-2Q5R1B6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.19■□□□□ 0.5
Trav8d-2Q5R1B6 Gm10819-201ENSMUST00000099988 561 ntBASIC18.19■□□□□ 0.5
Trav8d-2Q5R1B6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trav8d-2Q5R1B6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8d-2Q5R1B6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8d-2Q5R1B6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Trav8d-2Q5R1B6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8d-2Q5R1B6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8d-2Q5R1B6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8d-2Q5R1B6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav8d-2Q5R1B6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trav8d-2Q5R1B6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav8d-2Q5R1B6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8d-2Q5R1B6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8d-2Q5R1B6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav8d-2Q5R1B6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav8d-2Q5R1B6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.18■□□□□ 0.5
Trav8d-2Q5R1B6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Gm15375-201ENSMUST00000119510 849 ntBASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Gm11539-201ENSMUST00000119837 557 ntBASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Gm13436-201ENSMUST00000120418 567 ntBASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Timm23-208ENSMUST00000226683 750 ntBASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8d-2Q5R1B6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8d-2Q5R1B6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8d-2Q5R1B6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Trav8d-2Q5R1B6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8d-2Q5R1B6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.16■□□□□ 0.5
Trav8d-2Q5R1B6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8d-2Q5R1B6 Gm6659-201ENSMUST00000174752 547 ntBASIC18.16■□□□□ 0.5
Trav8d-2Q5R1B6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.16■□□□□ 0.5
Trav8d-2Q5R1B6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8d-2Q5R1B6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav8d-2Q5R1B6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trav8d-2Q5R1B6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Trav8d-2Q5R1B6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav8d-2Q5R1B6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav8d-2Q5R1B6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav8d-2Q5R1B6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav8d-2Q5R1B6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trav8d-2Q5R1B6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav8d-2Q5R1B6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms