Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clhc1Q5M6W3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Clhc1Q5M6W3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clhc1Q5M6W3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clhc1Q5M6W3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clhc1Q5M6W3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.91■□□□□ 0.46
Clhc1Q5M6W3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clhc1Q5M6W3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clhc1Q5M6W3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.91■□□□□ 0.46
Clhc1Q5M6W3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Clhc1Q5M6W3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clhc1Q5M6W3 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.91■□□□□ 0.46
Clhc1Q5M6W3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clhc1Q5M6W3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clhc1Q5M6W3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clhc1Q5M6W3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Gm43137-201ENSMUST00000198052 594 ntBASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clhc1Q5M6W3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clhc1Q5M6W3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clhc1Q5M6W3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.89■□□□□ 0.45
Clhc1Q5M6W3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clhc1Q5M6W3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clhc1Q5M6W3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.89■□□□□ 0.45
Clhc1Q5M6W3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clhc1Q5M6W3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clhc1Q5M6W3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Clhc1Q5M6W3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clhc1Q5M6W3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clhc1Q5M6W3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clhc1Q5M6W3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clhc1Q5M6W3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clhc1Q5M6W3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Clhc1Q5M6W3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 Gm12821-201ENSMUST00000120022 600 ntBASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.88■□□□□ 0.45
Clhc1Q5M6W3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clhc1Q5M6W3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Clhc1Q5M6W3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clhc1Q5M6W3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clhc1Q5M6W3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clhc1Q5M6W3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clhc1Q5M6W3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Clhc1Q5M6W3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clhc1Q5M6W3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clhc1Q5M6W3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Clhc1Q5M6W3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clhc1Q5M6W3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clhc1Q5M6W3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Clhc1Q5M6W3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clhc1Q5M6W3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clhc1Q5M6W3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clhc1Q5M6W3 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.86■□□□□ 0.45
Clhc1Q5M6W3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.86■□□□□ 0.45
Clhc1Q5M6W3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clhc1Q5M6W3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clhc1Q5M6W3 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.86■□□□□ 0.45
Clhc1Q5M6W3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Clhc1Q5M6W3 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.86■□□□□ 0.45
Clhc1Q5M6W3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clhc1Q5M6W3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Clhc1Q5M6W3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clhc1Q5M6W3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clhc1Q5M6W3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Clhc1Q5M6W3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms