Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Gm12251-201ENSMUST00000117893 792 ntBASIC19.39■□□□□ 0.69
Vps41Q5KU39 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Vps41Q5KU39 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps41Q5KU39 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps41Q5KU39 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps41Q5KU39 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps41Q5KU39 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Vps41Q5KU39 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps41Q5KU39 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Vps41Q5KU39 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.39■□□□□ 0.69
Vps41Q5KU39 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps41Q5KU39 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps41Q5KU39 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps41Q5KU39 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps41Q5KU39 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.38■□□□□ 0.69
Vps41Q5KU39 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Vps41Q5KU39 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Vps41Q5KU39 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps41Q5KU39 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps41Q5KU39 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps41Q5KU39 Gm9847-201ENSMUST00000052528 599 ntBASIC19.38■□□□□ 0.69
Vps41Q5KU39 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Vps41Q5KU39 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps41Q5KU39 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps41Q5KU39 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps41Q5KU39 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.36■□□□□ 0.69
Vps41Q5KU39 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.36■□□□□ 0.69
Vps41Q5KU39 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps41Q5KU39 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps41Q5KU39 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Vps41Q5KU39 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps41Q5KU39 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Vps41Q5KU39 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps41Q5KU39 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps41Q5KU39 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Vps41Q5KU39 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps41Q5KU39 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps41Q5KU39 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Vps41Q5KU39 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.35■□□□□ 0.69
Vps41Q5KU39 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.35■□□□□ 0.69
Vps41Q5KU39 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vps41Q5KU39 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps41Q5KU39 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps41Q5KU39 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps41Q5KU39 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps41Q5KU39 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps41Q5KU39 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vps41Q5KU39 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Vps41Q5KU39 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps41Q5KU39 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vps41Q5KU39 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Vps41Q5KU39 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.34■□□□□ 0.69
Vps41Q5KU39 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.34■□□□□ 0.69
Vps41Q5KU39 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.34■□□□□ 0.69
Vps41Q5KU39 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps41Q5KU39 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps41Q5KU39 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Vps41Q5KU39 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Vps41Q5KU39 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.34■□□□□ 0.69
Vps41Q5KU39 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps41Q5KU39 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps41Q5KU39 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps41Q5KU39 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps41Q5KU39 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps41Q5KU39 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps41Q5KU39 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.33■□□□□ 0.68
Vps41Q5KU39 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps41Q5KU39 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.33■□□□□ 0.68
Vps41Q5KU39 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.33■□□□□ 0.68
Vps41Q5KU39 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.33■□□□□ 0.68
Vps41Q5KU39 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps41Q5KU39 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps41Q5KU39 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps41Q5KU39 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Vps41Q5KU39 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps41Q5KU39 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps41Q5KU39 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps41Q5KU39 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps41Q5KU39 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms