Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rc3h1Q4VGL6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rc3h1Q4VGL6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rc3h1Q4VGL6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rc3h1Q4VGL6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Rc3h1Q4VGL6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rc3h1Q4VGL6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Rc3h1Q4VGL6 Gm13168-201ENSMUST00000121771 632 ntBASIC21.55■■□□□ 1.04
Rc3h1Q4VGL6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rc3h1Q4VGL6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Rc3h1Q4VGL6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rc3h1Q4VGL6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rc3h1Q4VGL6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.55■■□□□ 1.04
Rc3h1Q4VGL6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rc3h1Q4VGL6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rc3h1Q4VGL6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rc3h1Q4VGL6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rc3h1Q4VGL6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Rc3h1Q4VGL6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rc3h1Q4VGL6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Rc3h1Q4VGL6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rc3h1Q4VGL6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rc3h1Q4VGL6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rc3h1Q4VGL6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rc3h1Q4VGL6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rc3h1Q4VGL6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rc3h1Q4VGL6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Rc3h1Q4VGL6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rc3h1Q4VGL6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rc3h1Q4VGL6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.53■■□□□ 1.04
Rc3h1Q4VGL6 Gm8520-201ENSMUST00000186517 868 ntBASIC21.53■■□□□ 1.04
Rc3h1Q4VGL6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rc3h1Q4VGL6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rc3h1Q4VGL6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.53■■□□□ 1.04
Rc3h1Q4VGL6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rc3h1Q4VGL6 Dio3-201ENSMUST00000097228 1449 ntBASIC21.53■■□□□ 1.04
Rc3h1Q4VGL6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h1Q4VGL6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h1Q4VGL6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.52■■□□□ 1.04
Rc3h1Q4VGL6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h1Q4VGL6 Gm2559-201ENSMUST00000201323 363 ntBASIC21.52■■□□□ 1.04
Rc3h1Q4VGL6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h1Q4VGL6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h1Q4VGL6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h1Q4VGL6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h1Q4VGL6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h1Q4VGL6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rc3h1Q4VGL6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Rc3h1Q4VGL6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rc3h1Q4VGL6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rc3h1Q4VGL6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rc3h1Q4VGL6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.51■■□□□ 1.03
Rc3h1Q4VGL6 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.51■■□□□ 1.03
Rc3h1Q4VGL6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.51■■□□□ 1.03
Rc3h1Q4VGL6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Rc3h1Q4VGL6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rc3h1Q4VGL6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rc3h1Q4VGL6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rc3h1Q4VGL6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rc3h1Q4VGL6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rc3h1Q4VGL6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rc3h1Q4VGL6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rc3h1Q4VGL6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rc3h1Q4VGL6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rc3h1Q4VGL6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rc3h1Q4VGL6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rc3h1Q4VGL6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rc3h1Q4VGL6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rc3h1Q4VGL6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rc3h1Q4VGL6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rc3h1Q4VGL6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Rc3h1Q4VGL6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rc3h1Q4VGL6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rc3h1Q4VGL6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rc3h1Q4VGL6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rc3h1Q4VGL6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.48■■□□□ 1.03
Rc3h1Q4VGL6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rc3h1Q4VGL6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Rc3h1Q4VGL6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rc3h1Q4VGL6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rc3h1Q4VGL6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rc3h1Q4VGL6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.48■■□□□ 1.03
Rc3h1Q4VGL6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rc3h1Q4VGL6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rc3h1Q4VGL6 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.48■■□□□ 1.03
Rc3h1Q4VGL6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rc3h1Q4VGL6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rc3h1Q4VGL6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rc3h1Q4VGL6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.47■■□□□ 1.03
Rc3h1Q4VGL6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rc3h1Q4VGL6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rc3h1Q4VGL6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.47■■□□□ 1.03
Rc3h1Q4VGL6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Rc3h1Q4VGL6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Rc3h1Q4VGL6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rc3h1Q4VGL6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Rc3h1Q4VGL6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
Rc3h1Q4VGL6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.47■■□□□ 1.03
Rc3h1Q4VGL6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.46■■□□□ 1.03
Rc3h1Q4VGL6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms