Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Herc2Q4U2R1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.24□□□□□ -0.61
Herc2Q4U2R1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Herc2Q4U2R1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Herc2Q4U2R1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Herc2Q4U2R1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Herc2Q4U2R1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Herc2Q4U2R1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.24□□□□□ -0.61
Herc2Q4U2R1 Gm28659-201ENSMUST00000188013 759 ntBASIC11.24□□□□□ -0.61
Herc2Q4U2R1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Gm27742-201ENSMUST00000184667 60 ntBASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Herc2Q4U2R1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Gm11927-201ENSMUST00000118472 759 ntBASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Gm43575-201ENSMUST00000196420 516 ntBASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Herc2Q4U2R1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.21□□□□□ -0.61
Herc2Q4U2R1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Herc2Q4U2R1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Herc2Q4U2R1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Herc2Q4U2R1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Herc2Q4U2R1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Herc2Q4U2R1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Herc2Q4U2R1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Herc2Q4U2R1 Gm43347-201ENSMUST00000200226 580 ntBASIC11.21□□□□□ -0.61
Herc2Q4U2R1 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.21□□□□□ -0.61
Herc2Q4U2R1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Herc2Q4U2R1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Herc2Q4U2R1 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.21□□□□□ -0.61
Herc2Q4U2R1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC11.21□□□□□ -0.62
Herc2Q4U2R1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Herc2Q4U2R1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC11.21□□□□□ -0.62
Herc2Q4U2R1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Herc2Q4U2R1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Herc2Q4U2R1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Herc2Q4U2R1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Herc2Q4U2R1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Herc2Q4U2R1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.2□□□□□ -0.62
Herc2Q4U2R1 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.2□□□□□ -0.62
Herc2Q4U2R1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.2□□□□□ -0.62
Herc2Q4U2R1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Herc2Q4U2R1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Herc2Q4U2R1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Herc2Q4U2R1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC11.2□□□□□ -0.62
Herc2Q4U2R1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Herc2Q4U2R1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Herc2Q4U2R1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.2□□□□□ -0.62
Herc2Q4U2R1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Herc2Q4U2R1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Herc2Q4U2R1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Herc2Q4U2R1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.2□□□□□ -0.62
Herc2Q4U2R1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Herc2Q4U2R1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Herc2Q4U2R1 Gm10138-203ENSMUST00000206952 366 ntBASIC11.19□□□□□ -0.62
Herc2Q4U2R1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Herc2Q4U2R1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Herc2Q4U2R1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Herc2Q4U2R1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Herc2Q4U2R1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Herc2Q4U2R1 Gm37415-201ENSMUST00000192265 2054 ntBASIC11.19□□□□□ -0.62
Herc2Q4U2R1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Herc2Q4U2R1 Gm26971-201ENSMUST00000182423 1072 ntBASIC11.19□□□□□ -0.62
Herc2Q4U2R1 Mir8098-201ENSMUST00000184011 137 ntBASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms