Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fam196aQ3USH1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam196aQ3USH1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Fam196aQ3USH1 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.76■□□□□ 0.59
Fam196aQ3USH1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam196aQ3USH1 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.75■□□□□ 0.59
Fam196aQ3USH1 Gm12382-201ENSMUST00000122005 922 ntBASIC18.75■□□□□ 0.59
Fam196aQ3USH1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Fam196aQ3USH1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Fam196aQ3USH1 Gm18025-201ENSMUST00000221733 862 ntBASIC18.75■□□□□ 0.59
Fam196aQ3USH1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Fam196aQ3USH1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fam196aQ3USH1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.75■□□□□ 0.59
Fam196aQ3USH1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fam196aQ3USH1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam196aQ3USH1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Fam196aQ3USH1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam196aQ3USH1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Fam196aQ3USH1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam196aQ3USH1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Fam196aQ3USH1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam196aQ3USH1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.74■□□□□ 0.59
Fam196aQ3USH1 Gm10138-203ENSMUST00000206952 366 ntBASIC18.74■□□□□ 0.59
Fam196aQ3USH1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Fam196aQ3USH1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam196aQ3USH1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Fam196aQ3USH1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam196aQ3USH1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Fam196aQ3USH1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Fam196aQ3USH1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam196aQ3USH1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Fam196aQ3USH1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fam196aQ3USH1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fam196aQ3USH1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.73■□□□□ 0.59
Fam196aQ3USH1 Gm42545-201ENSMUST00000202755 922 ntBASIC18.73■□□□□ 0.59
Fam196aQ3USH1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.73■□□□□ 0.59
Fam196aQ3USH1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fam196aQ3USH1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Fam196aQ3USH1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fam196aQ3USH1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fam196aQ3USH1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam196aQ3USH1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam196aQ3USH1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.72■□□□□ 0.59
Fam196aQ3USH1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam196aQ3USH1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam196aQ3USH1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.72■□□□□ 0.59
Fam196aQ3USH1 Gm18032-201ENSMUST00000222541 538 ntBASIC18.72■□□□□ 0.59
Fam196aQ3USH1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam196aQ3USH1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam196aQ3USH1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.71■□□□□ 0.59
Fam196aQ3USH1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Fam196aQ3USH1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Fam196aQ3USH1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Fam196aQ3USH1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Fam196aQ3USH1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Fam196aQ3USH1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam196aQ3USH1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Fam196aQ3USH1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Fam196aQ3USH1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Fam196aQ3USH1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam196aQ3USH1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam196aQ3USH1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam196aQ3USH1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Fam196aQ3USH1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.7■□□□□ 0.58
Fam196aQ3USH1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam196aQ3USH1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam196aQ3USH1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam196aQ3USH1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam196aQ3USH1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam196aQ3USH1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam196aQ3USH1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam196aQ3USH1 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.7■□□□□ 0.58
Fam196aQ3USH1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fam196aQ3USH1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Fam196aQ3USH1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fam196aQ3USH1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Fam196aQ3USH1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fam196aQ3USH1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Fam196aQ3USH1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Fam196aQ3USH1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fam196aQ3USH1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fam196aQ3USH1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.69■□□□□ 0.58
Fam196aQ3USH1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fam196aQ3USH1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Fam196aQ3USH1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fam196aQ3USH1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fam196aQ3USH1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.68■□□□□ 0.58
Fam196aQ3USH1 Gm15375-201ENSMUST00000119510 849 ntBASIC18.68■□□□□ 0.58
Fam196aQ3USH1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fam196aQ3USH1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Fam196aQ3USH1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fam196aQ3USH1 Gm37292-201ENSMUST00000192062 758 ntBASIC18.68■□□□□ 0.58
Fam196aQ3USH1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.68■□□□□ 0.58
Fam196aQ3USH1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.68■□□□□ 0.58
Fam196aQ3USH1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Fam196aQ3USH1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Fam196aQ3USH1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fam196aQ3USH1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fam196aQ3USH1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fam196aQ3USH1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms