Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm37292-201ENSMUST00000192062 758 ntBASIC22.28■■□□□ 1.16
Col5a2Q3U962 Gm10138-203ENSMUST00000206952 366 ntBASIC22.28■■□□□ 1.16
Col5a2Q3U962 AC156016.1-201ENSMUST00000227190 1035 ntBASIC22.28■■□□□ 1.16
Col5a2Q3U962 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col5a2Q3U962 Mtag2-201ENSMUST00000058665 714 ntBASIC22.28■■□□□ 1.16
Col5a2Q3U962 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col5a2Q3U962 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Col5a2Q3U962 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col5a2Q3U962 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col5a2Q3U962 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col5a2Q3U962 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col5a2Q3U962 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col5a2Q3U962 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC22.28■■□□□ 1.16
Col5a2Q3U962 Otx2os1-204ENSMUST00000227221 751 ntBASIC22.28■■□□□ 1.16
Col5a2Q3U962 AC107452.1-201ENSMUST00000227963 481 ntBASIC22.28■■□□□ 1.16
Col5a2Q3U962 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col5a2Q3U962 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC22.27■■□□□ 1.16
Col5a2Q3U962 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.27■■□□□ 1.16
Col5a2Q3U962 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col5a2Q3U962 Gm15375-201ENSMUST00000119510 849 ntBASIC22.27■■□□□ 1.16
Col5a2Q3U962 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Col5a2Q3U962 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC22.27■■□□□ 1.16
Col5a2Q3U962 Gm45560-201ENSMUST00000211492 1472 ntBASIC22.27■■□□□ 1.16
Col5a2Q3U962 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
Col5a2Q3U962 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Col5a2Q3U962 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Col5a2Q3U962 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Col5a2Q3U962 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC22.26■■□□□ 1.15
Col5a2Q3U962 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC22.26■■□□□ 1.15
Col5a2Q3U962 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col5a2Q3U962 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col5a2Q3U962 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
Col5a2Q3U962 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col5a2Q3U962 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Col5a2Q3U962 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col5a2Q3U962 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col5a2Q3U962 AC124581.1-201ENSMUST00000225416 1399 ntBASIC22.25■■□□□ 1.15
Col5a2Q3U962 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col5a2Q3U962 Gm6345-202ENSMUST00000180900 204 ntBASIC22.25■■□□□ 1.15
Col5a2Q3U962 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col5a2Q3U962 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col5a2Q3U962 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col5a2Q3U962 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Col5a2Q3U962 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col5a2Q3U962 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Col5a2Q3U962 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col5a2Q3U962 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Col5a2Q3U962 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col5a2Q3U962 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Col5a2Q3U962 Gm7712-202ENSMUST00000222331 1510 ntBASIC22.24■■□□□ 1.15
Col5a2Q3U962 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col5a2Q3U962 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC22.23■■□□□ 1.15
Col5a2Q3U962 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col5a2Q3U962 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC22.23■■□□□ 1.15
Col5a2Q3U962 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC22.23■■□□□ 1.15
Col5a2Q3U962 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC22.23■■□□□ 1.15
Col5a2Q3U962 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col5a2Q3U962 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.23■■□□□ 1.15
Col5a2Q3U962 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
Col5a2Q3U962 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC22.22■■□□□ 1.15
Col5a2Q3U962 Gm23634-201ENSMUST00000175071 91 ntBASIC22.22■■□□□ 1.15
Col5a2Q3U962 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC22.22■■□□□ 1.15
Col5a2Q3U962 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC22.22■■□□□ 1.15
Col5a2Q3U962 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col5a2Q3U962 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Col5a2Q3U962 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col5a2Q3U962 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col5a2Q3U962 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col5a2Q3U962 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col5a2Q3U962 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Col5a2Q3U962 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col5a2Q3U962 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC22.22■■□□□ 1.15
Col5a2Q3U962 Gm33142-201ENSMUST00000193913 867 ntBASIC22.22■■□□□ 1.15
Col5a2Q3U962 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col5a2Q3U962 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col5a2Q3U962 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col5a2Q3U962 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Col5a2Q3U962 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Col5a2Q3U962 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col5a2Q3U962 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col5a2Q3U962 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col5a2Q3U962 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC22.21■■□□□ 1.15
Col5a2Q3U962 Gm42545-201ENSMUST00000202755 922 ntBASIC22.21■■□□□ 1.15
Col5a2Q3U962 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC22.21■■□□□ 1.15
Col5a2Q3U962 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Col5a2Q3U962 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Col5a2Q3U962 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
Col5a2Q3U962 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Col5a2Q3U962 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Col5a2Q3U962 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC22.2■■□□□ 1.14
Col5a2Q3U962 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col5a2Q3U962 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col5a2Q3U962 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col5a2Q3U962 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC22.2■■□□□ 1.14
Col5a2Q3U962 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Col5a2Q3U962 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col5a2Q3U962 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col5a2Q3U962 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col5a2Q3U962 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col5a2Q3U962 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms