Protein–RNA interactions for Protein: Q3U0P1

Palb2, Partner and localizer of BRCA2, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Palb2Q3U0P1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Palb2Q3U0P1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Palb2Q3U0P1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.77■□□□□ 0.92
Palb2Q3U0P1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Palb2Q3U0P1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Palb2Q3U0P1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Palb2Q3U0P1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Palb2Q3U0P1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Palb2Q3U0P1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Palb2Q3U0P1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Palb2Q3U0P1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Palb2Q3U0P1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Palb2Q3U0P1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.76■□□□□ 0.91
Palb2Q3U0P1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Palb2Q3U0P1 Gm18666-201ENSMUST00000190039 958 ntBASIC20.76■□□□□ 0.91
Palb2Q3U0P1 Gm37055-201ENSMUST00000191866 133 ntBASIC20.76■□□□□ 0.91
Palb2Q3U0P1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.76■□□□□ 0.91
Palb2Q3U0P1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Palb2Q3U0P1 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.76■□□□□ 0.91
Palb2Q3U0P1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Palb2Q3U0P1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Palb2Q3U0P1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Palb2Q3U0P1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Palb2Q3U0P1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Palb2Q3U0P1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Palb2Q3U0P1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Palb2Q3U0P1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Palb2Q3U0P1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Palb2Q3U0P1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Palb2Q3U0P1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.75■□□□□ 0.91
Palb2Q3U0P1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Palb2Q3U0P1 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.75■□□□□ 0.91
Palb2Q3U0P1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Palb2Q3U0P1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Palb2Q3U0P1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Palb2Q3U0P1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Palb2Q3U0P1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Palb2Q3U0P1 Gm10698-201ENSMUST00000182663 604 ntBASIC20.74■□□□□ 0.91
Palb2Q3U0P1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Palb2Q3U0P1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Palb2Q3U0P1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Palb2Q3U0P1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Palb2Q3U0P1 Gm11249-201ENSMUST00000117071 859 ntBASIC20.73■□□□□ 0.91
Palb2Q3U0P1 Gm11643-201ENSMUST00000119578 864 ntBASIC20.73■□□□□ 0.91
Palb2Q3U0P1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Palb2Q3U0P1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.73■□□□□ 0.91
Palb2Q3U0P1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Palb2Q3U0P1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.73■□□□□ 0.91
Palb2Q3U0P1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Palb2Q3U0P1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Palb2Q3U0P1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Palb2Q3U0P1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Palb2Q3U0P1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Palb2Q3U0P1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Palb2Q3U0P1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Palb2Q3U0P1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Palb2Q3U0P1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Palb2Q3U0P1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Palb2Q3U0P1 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.72■□□□□ 0.91
Palb2Q3U0P1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Palb2Q3U0P1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Palb2Q3U0P1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Palb2Q3U0P1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Palb2Q3U0P1 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.71■□□□□ 0.91
Palb2Q3U0P1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Palb2Q3U0P1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Palb2Q3U0P1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Palb2Q3U0P1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Palb2Q3U0P1 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.71■□□□□ 0.91
Palb2Q3U0P1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Palb2Q3U0P1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.71■□□□□ 0.91
Palb2Q3U0P1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
Palb2Q3U0P1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.71■□□□□ 0.91
Palb2Q3U0P1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Palb2Q3U0P1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Palb2Q3U0P1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Palb2Q3U0P1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Palb2Q3U0P1 Gm15378-201ENSMUST00000121894 207 ntBASIC20.7■□□□□ 0.9
Palb2Q3U0P1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Palb2Q3U0P1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.7■□□□□ 0.9
Palb2Q3U0P1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.7■□□□□ 0.9
Palb2Q3U0P1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Palb2Q3U0P1 Gm9987-201ENSMUST00000069768 567 ntBASIC20.7■□□□□ 0.9
Palb2Q3U0P1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Palb2Q3U0P1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Palb2Q3U0P1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.69■□□□□ 0.9
Palb2Q3U0P1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
Palb2Q3U0P1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Palb2Q3U0P1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Palb2Q3U0P1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.69■□□□□ 0.9
Palb2Q3U0P1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.69■□□□□ 0.9
Palb2Q3U0P1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Palb2Q3U0P1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Palb2Q3U0P1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Palb2Q3U0P1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Palb2Q3U0P1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Palb2Q3U0P1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Palb2Q3U0P1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Palb2Q3U0P1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Palb2Q3U0P1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms