Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Cul4aQ3TCH7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cul4aQ3TCH7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cul4aQ3TCH7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.57■□□□□ 0.72
Cul4aQ3TCH7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cul4aQ3TCH7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cul4aQ3TCH7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.57■□□□□ 0.72
Cul4aQ3TCH7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.57■□□□□ 0.72
Cul4aQ3TCH7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cul4aQ3TCH7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.57■□□□□ 0.72
Cul4aQ3TCH7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.57■□□□□ 0.72
Cul4aQ3TCH7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cul4aQ3TCH7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cul4aQ3TCH7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cul4aQ3TCH7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.57■□□□□ 0.72
Cul4aQ3TCH7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Cul4aQ3TCH7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cul4aQ3TCH7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cul4aQ3TCH7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cul4aQ3TCH7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cul4aQ3TCH7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cul4aQ3TCH7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cul4aQ3TCH7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cul4aQ3TCH7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cul4aQ3TCH7 Gm38205-201ENSMUST00000192243 258 ntBASIC19.56■□□□□ 0.72
Cul4aQ3TCH7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Cul4aQ3TCH7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Cul4aQ3TCH7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.56■□□□□ 0.72
Cul4aQ3TCH7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cul4aQ3TCH7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cul4aQ3TCH7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 Gm26833-201ENSMUST00000180899 440 ntBASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cul4aQ3TCH7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cul4aQ3TCH7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cul4aQ3TCH7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.54■□□□□ 0.72
Cul4aQ3TCH7 Gm40848-201ENSMUST00000221998 324 ntBASIC19.54■□□□□ 0.72
Cul4aQ3TCH7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cul4aQ3TCH7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cul4aQ3TCH7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cul4aQ3TCH7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cul4aQ3TCH7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cul4aQ3TCH7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cul4aQ3TCH7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cul4aQ3TCH7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cul4aQ3TCH7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cul4aQ3TCH7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cul4aQ3TCH7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cul4aQ3TCH7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cul4aQ3TCH7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cul4aQ3TCH7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.53■□□□□ 0.72
Cul4aQ3TCH7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.53■□□□□ 0.72
Cul4aQ3TCH7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cul4aQ3TCH7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cul4aQ3TCH7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cul4aQ3TCH7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cul4aQ3TCH7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cul4aQ3TCH7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Cul4aQ3TCH7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cul4aQ3TCH7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cul4aQ3TCH7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cul4aQ3TCH7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.52■□□□□ 0.72
Cul4aQ3TCH7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cul4aQ3TCH7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cul4aQ3TCH7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.52■□□□□ 0.72
Cul4aQ3TCH7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cul4aQ3TCH7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cul4aQ3TCH7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cul4aQ3TCH7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cul4aQ3TCH7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cul4aQ3TCH7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cul4aQ3TCH7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cul4aQ3TCH7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cul4aQ3TCH7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cul4aQ3TCH7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Cul4aQ3TCH7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cul4aQ3TCH7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cul4aQ3TCH7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Cul4aQ3TCH7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cul4aQ3TCH7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cul4aQ3TCH7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cul4aQ3TCH7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cul4aQ3TCH7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cul4aQ3TCH7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cul4aQ3TCH7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.5■□□□□ 0.71
Cul4aQ3TCH7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms