Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Treml4Q3LRV9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Treml4Q3LRV9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Dio3-201ENSMUST00000097228 1449 ntBASIC17.42■□□□□ 0.38
Treml4Q3LRV9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Treml4Q3LRV9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Treml4Q3LRV9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.4■□□□□ 0.38
Treml4Q3LRV9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Treml4Q3LRV9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Treml4Q3LRV9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Treml4Q3LRV9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.4■□□□□ 0.38
Treml4Q3LRV9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Treml4Q3LRV9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.4■□□□□ 0.38
Treml4Q3LRV9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Treml4Q3LRV9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Treml4Q3LRV9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Treml4Q3LRV9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Treml4Q3LRV9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Treml4Q3LRV9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Treml4Q3LRV9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Treml4Q3LRV9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Treml4Q3LRV9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
Treml4Q3LRV9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Treml4Q3LRV9 Gm715-201ENSMUST00000117865 831 ntBASIC17.39■□□□□ 0.37
Treml4Q3LRV9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Treml4Q3LRV9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Treml4Q3LRV9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Treml4Q3LRV9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Treml4Q3LRV9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Treml4Q3LRV9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Treml4Q3LRV9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Treml4Q3LRV9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Treml4Q3LRV9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Treml4Q3LRV9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.39■□□□□ 0.37
Treml4Q3LRV9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Treml4Q3LRV9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Treml4Q3LRV9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.38■□□□□ 0.37
Treml4Q3LRV9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Treml4Q3LRV9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Treml4Q3LRV9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Treml4Q3LRV9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Treml4Q3LRV9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Treml4Q3LRV9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Treml4Q3LRV9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Treml4Q3LRV9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Treml4Q3LRV9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Treml4Q3LRV9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Treml4Q3LRV9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Treml4Q3LRV9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Treml4Q3LRV9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Treml4Q3LRV9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Treml4Q3LRV9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Treml4Q3LRV9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Treml4Q3LRV9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Treml4Q3LRV9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Treml4Q3LRV9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.37■□□□□ 0.37
Treml4Q3LRV9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.37■□□□□ 0.37
Treml4Q3LRV9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Treml4Q3LRV9 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.37■□□□□ 0.37
Treml4Q3LRV9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
Treml4Q3LRV9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Treml4Q3LRV9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.37■□□□□ 0.37
Treml4Q3LRV9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Treml4Q3LRV9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Treml4Q3LRV9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms