Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col19a1Q0VF58 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col19a1Q0VF58 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Col19a1Q0VF58 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col19a1Q0VF58 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col19a1Q0VF58 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col19a1Q0VF58 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col19a1Q0VF58 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col19a1Q0VF58 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col19a1Q0VF58 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col19a1Q0VF58 Zfp783-201ENSMUST00000095946 670 ntBASIC20■□□□□ 0.79
Col19a1Q0VF58 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col19a1Q0VF58 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col19a1Q0VF58 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20■□□□□ 0.79
Col19a1Q0VF58 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.99■□□□□ 0.79
Col19a1Q0VF58 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col19a1Q0VF58 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Col19a1Q0VF58 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col19a1Q0VF58 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col19a1Q0VF58 Gm7284-201ENSMUST00000131667 944 ntBASIC19.99■□□□□ 0.79
Col19a1Q0VF58 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col19a1Q0VF58 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col19a1Q0VF58 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col19a1Q0VF58 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col19a1Q0VF58 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.99■□□□□ 0.79
Col19a1Q0VF58 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Col19a1Q0VF58 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col19a1Q0VF58 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col19a1Q0VF58 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Col19a1Q0VF58 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col19a1Q0VF58 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col19a1Q0VF58 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col19a1Q0VF58 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col19a1Q0VF58 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col19a1Q0VF58 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col19a1Q0VF58 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.98■□□□□ 0.79
Col19a1Q0VF58 Gm45058-201ENSMUST00000205810 766 ntBASIC19.98■□□□□ 0.79
Col19a1Q0VF58 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.98■□□□□ 0.79
Col19a1Q0VF58 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col19a1Q0VF58 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Col19a1Q0VF58 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col19a1Q0VF58 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col19a1Q0VF58 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col19a1Q0VF58 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col19a1Q0VF58 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.97■□□□□ 0.79
Col19a1Q0VF58 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.97■□□□□ 0.79
Col19a1Q0VF58 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Col19a1Q0VF58 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col19a1Q0VF58 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col19a1Q0VF58 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col19a1Q0VF58 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col19a1Q0VF58 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col19a1Q0VF58 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col19a1Q0VF58 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.97■□□□□ 0.79
Col19a1Q0VF58 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.96■□□□□ 0.79
Col19a1Q0VF58 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col19a1Q0VF58 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col19a1Q0VF58 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col19a1Q0VF58 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.95■□□□□ 0.78
Col19a1Q0VF58 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Col19a1Q0VF58 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col19a1Q0VF58 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col19a1Q0VF58 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Col19a1Q0VF58 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.95■□□□□ 0.78
Col19a1Q0VF58 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col19a1Q0VF58 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col19a1Q0VF58 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.95■□□□□ 0.78
Col19a1Q0VF58 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Col19a1Q0VF58 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col19a1Q0VF58 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col19a1Q0VF58 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col19a1Q0VF58 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col19a1Q0VF58 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Col19a1Q0VF58 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.94■□□□□ 0.78
Col19a1Q0VF58 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Col19a1Q0VF58 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.94■□□□□ 0.78
Col19a1Q0VF58 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Col19a1Q0VF58 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col19a1Q0VF58 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col19a1Q0VF58 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.94■□□□□ 0.78
Col19a1Q0VF58 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms