Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Spcs1-204ENSMUST00000226782 949 ntBASIC17.94■□□□□ 0.46
Ptchd3Q0EEE2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ptchd3Q0EEE2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ptchd3Q0EEE2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.94■□□□□ 0.46
Ptchd3Q0EEE2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ptchd3Q0EEE2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ptchd3Q0EEE2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ptchd3Q0EEE2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ptchd3Q0EEE2 Gm12251-201ENSMUST00000117893 792 ntBASIC17.93■□□□□ 0.46
Ptchd3Q0EEE2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.93■□□□□ 0.46
Ptchd3Q0EEE2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.93■□□□□ 0.46
Ptchd3Q0EEE2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ptchd3Q0EEE2 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.93■□□□□ 0.46
Ptchd3Q0EEE2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ptchd3Q0EEE2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ptchd3Q0EEE2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.92■□□□□ 0.46
Ptchd3Q0EEE2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ptchd3Q0EEE2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ptchd3Q0EEE2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ptchd3Q0EEE2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ptchd3Q0EEE2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Ptchd3Q0EEE2 Mir7075-201ENSMUST00000184187 82 ntBASIC17.92■□□□□ 0.46
Ptchd3Q0EEE2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ptchd3Q0EEE2 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.92■□□□□ 0.46
Ptchd3Q0EEE2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ptchd3Q0EEE2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ptchd3Q0EEE2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ptchd3Q0EEE2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptchd3Q0EEE2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptchd3Q0EEE2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ptchd3Q0EEE2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptchd3Q0EEE2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptchd3Q0EEE2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptchd3Q0EEE2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptchd3Q0EEE2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ptchd3Q0EEE2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptchd3Q0EEE2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ptchd3Q0EEE2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ptchd3Q0EEE2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ptchd3Q0EEE2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptchd3Q0EEE2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptchd3Q0EEE2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ptchd3Q0EEE2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
Ptchd3Q0EEE2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptchd3Q0EEE2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptchd3Q0EEE2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptchd3Q0EEE2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptchd3Q0EEE2 Gm45417-201ENSMUST00000209533 758 ntBASIC17.89■□□□□ 0.45
Ptchd3Q0EEE2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.89■□□□□ 0.45
Ptchd3Q0EEE2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptchd3Q0EEE2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptchd3Q0EEE2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptchd3Q0EEE2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptchd3Q0EEE2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptchd3Q0EEE2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptchd3Q0EEE2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptchd3Q0EEE2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptchd3Q0EEE2 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.88■□□□□ 0.45
Ptchd3Q0EEE2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptchd3Q0EEE2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptchd3Q0EEE2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptchd3Q0EEE2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptchd3Q0EEE2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptchd3Q0EEE2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptchd3Q0EEE2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ptchd3Q0EEE2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptchd3Q0EEE2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptchd3Q0EEE2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptchd3Q0EEE2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptchd3Q0EEE2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptchd3Q0EEE2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptchd3Q0EEE2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptchd3Q0EEE2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptchd3Q0EEE2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ptchd3Q0EEE2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.87■□□□□ 0.45
Ptchd3Q0EEE2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.87■□□□□ 0.45
Ptchd3Q0EEE2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ptchd3Q0EEE2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptchd3Q0EEE2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptchd3Q0EEE2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptchd3Q0EEE2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptchd3Q0EEE2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms