Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssrp1Q08943 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ssrp1Q08943 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ssrp1Q08943 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.7■□□□□ 0.9
Ssrp1Q08943 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssrp1Q08943 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ssrp1Q08943 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ssrp1Q08943 Reep4-203ENSMUST00000226563 1444 ntBASIC20.7■□□□□ 0.9
Ssrp1Q08943 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssrp1Q08943 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssrp1Q08943 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssrp1Q08943 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssrp1Q08943 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssrp1Q08943 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.69■□□□□ 0.9
Ssrp1Q08943 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.69■□□□□ 0.9
Ssrp1Q08943 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.69■□□□□ 0.9
Ssrp1Q08943 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ssrp1Q08943 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssrp1Q08943 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssrp1Q08943 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssrp1Q08943 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ssrp1Q08943 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssrp1Q08943 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssrp1Q08943 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssrp1Q08943 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.68■□□□□ 0.9
Ssrp1Q08943 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.68■□□□□ 0.9
Ssrp1Q08943 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssrp1Q08943 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssrp1Q08943 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssrp1Q08943 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssrp1Q08943 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ssrp1Q08943 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssrp1Q08943 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssrp1Q08943 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssrp1Q08943 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ssrp1Q08943 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssrp1Q08943 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Ssrp1Q08943 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssrp1Q08943 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssrp1Q08943 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssrp1Q08943 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ssrp1Q08943 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssrp1Q08943 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssrp1Q08943 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssrp1Q08943 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.66■□□□□ 0.9
Ssrp1Q08943 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.66■□□□□ 0.9
Ssrp1Q08943 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssrp1Q08943 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssrp1Q08943 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ssrp1Q08943 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssrp1Q08943 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssrp1Q08943 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssrp1Q08943 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssrp1Q08943 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssrp1Q08943 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.65■□□□□ 0.9
Ssrp1Q08943 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.65■□□□□ 0.9
Ssrp1Q08943 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Ssrp1Q08943 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.65■□□□□ 0.9
Ssrp1Q08943 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssrp1Q08943 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ssrp1Q08943 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ssrp1Q08943 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ssrp1Q08943 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ssrp1Q08943 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.64■□□□□ 0.9
Ssrp1Q08943 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ssrp1Q08943 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ssrp1Q08943 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ssrp1Q08943 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.64■□□□□ 0.89
Ssrp1Q08943 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssrp1Q08943 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
Ssrp1Q08943 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ssrp1Q08943 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.64■□□□□ 0.89
Ssrp1Q08943 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ssrp1Q08943 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssrp1Q08943 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssrp1Q08943 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssrp1Q08943 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.64■□□□□ 0.89
Ssrp1Q08943 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssrp1Q08943 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssrp1Q08943 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssrp1Q08943 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.63■□□□□ 0.89
Ssrp1Q08943 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssrp1Q08943 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssrp1Q08943 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssrp1Q08943 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssrp1Q08943 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssrp1Q08943 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Ssrp1Q08943 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ssrp1Q08943 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssrp1Q08943 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssrp1Q08943 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.63■□□□□ 0.89
Ssrp1Q08943 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.62■□□□□ 0.89
Ssrp1Q08943 Gm13146-201ENSMUST00000118508 780 ntBASIC20.62■□□□□ 0.89
Ssrp1Q08943 Gm13234-201ENSMUST00000120010 747 ntBASIC20.62■□□□□ 0.89
Ssrp1Q08943 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssrp1Q08943 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Ssrp1Q08943 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssrp1Q08943 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ssrp1Q08943 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssrp1Q08943 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms