Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cntn3Q07409 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.46■□□□□ 0.71
Cntn3Q07409 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Cntn3Q07409 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cntn3Q07409 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cntn3Q07409 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cntn3Q07409 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cntn3Q07409 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cntn3Q07409 Gm26524-201ENSMUST00000192339 390 ntBASIC19.46■□□□□ 0.71
Cntn3Q07409 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cntn3Q07409 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cntn3Q07409 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.46■□□□□ 0.71
Cntn3Q07409 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cntn3Q07409 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn3Q07409 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn3Q07409 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn3Q07409 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn3Q07409 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn3Q07409 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn3Q07409 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.45■□□□□ 0.7
Cntn3Q07409 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.45■□□□□ 0.7
Cntn3Q07409 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.45■□□□□ 0.7
Cntn3Q07409 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn3Q07409 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn3Q07409 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn3Q07409 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn3Q07409 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn3Q07409 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.45■□□□□ 0.7
Cntn3Q07409 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn3Q07409 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn3Q07409 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn3Q07409 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn3Q07409 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn3Q07409 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn3Q07409 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Cntn3Q07409 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn3Q07409 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Cntn3Q07409 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn3Q07409 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.44■□□□□ 0.7
Cntn3Q07409 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.44■□□□□ 0.7
Cntn3Q07409 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn3Q07409 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn3Q07409 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn3Q07409 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn3Q07409 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn3Q07409 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cntn3Q07409 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cntn3Q07409 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Cntn3Q07409 Gm12527-201ENSMUST00000117967 564 ntBASIC19.43■□□□□ 0.7
Cntn3Q07409 Gm10653-202ENSMUST00000139570 835 ntBASIC19.43■□□□□ 0.7
Cntn3Q07409 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.43■□□□□ 0.7
Cntn3Q07409 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cntn3Q07409 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cntn3Q07409 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.43■□□□□ 0.7
Cntn3Q07409 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cntn3Q07409 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cntn3Q07409 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cntn3Q07409 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Cntn3Q07409 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cntn3Q07409 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cntn3Q07409 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.42■□□□□ 0.7
Cntn3Q07409 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.42■□□□□ 0.7
Cntn3Q07409 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cntn3Q07409 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cntn3Q07409 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn3Q07409 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn3Q07409 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cntn3Q07409 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Cntn3Q07409 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn3Q07409 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn3Q07409 Rab3c-203ENSMUST00000224180 967 ntBASIC19.41■□□□□ 0.7
Cntn3Q07409 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn3Q07409 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn3Q07409 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn3Q07409 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn3Q07409 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn3Q07409 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn3Q07409 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn3Q07409 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn3Q07409 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntn3Q07409 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntn3Q07409 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cntn3Q07409 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.4■□□□□ 0.7
Cntn3Q07409 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.4■□□□□ 0.7
Cntn3Q07409 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cntn3Q07409 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.4■□□□□ 0.7
Cntn3Q07409 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cntn3Q07409 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cntn3Q07409 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntn3Q07409 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.4■□□□□ 0.7
Cntn3Q07409 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntn3Q07409 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cntn3Q07409 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cntn3Q07409 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Cntn3Q07409 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cntn3Q07409 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cntn3Q07409 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntn3Q07409 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.39■□□□□ 0.69
Cntn3Q07409 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntn3Q07409 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms