Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Emx1Q04742 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Emx1Q04742 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Emx1Q04742 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Emx1Q04742 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Emx1Q04742 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Emx1Q04742 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Emx1Q04742 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.29■□□□□ 0.36
Emx1Q04742 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Emx1Q04742 Gm43173-201ENSMUST00000202246 593 ntBASIC17.29■□□□□ 0.36
Emx1Q04742 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
Emx1Q04742 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Emx1Q04742 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Emx1Q04742 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.29■□□□□ 0.36
Emx1Q04742 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Emx1Q04742 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Emx1Q04742 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.28■□□□□ 0.36
Emx1Q04742 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Emx1Q04742 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Emx1Q04742 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Emx1Q04742 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.28■□□□□ 0.36
Emx1Q04742 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Emx1Q04742 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Emx1Q04742 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Emx1Q04742 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Emx1Q04742 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Emx1Q04742 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Emx1Q04742 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Emx1Q04742 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Emx1Q04742 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Emx1Q04742 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Emx1Q04742 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Emx1Q04742 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
Emx1Q04742 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Emx1Q04742 Gm43530-201ENSMUST00000195920 274 ntBASIC17.27■□□□□ 0.36
Emx1Q04742 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Emx1Q04742 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Emx1Q04742 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Emx1Q04742 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Emx1Q04742 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Emx1Q04742 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Emx1Q04742 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Emx1Q04742 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Emx1Q04742 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Emx1Q04742 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Emx1Q04742 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Emx1Q04742 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Emx1Q04742 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Emx1Q04742 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.26■□□□□ 0.35
Emx1Q04742 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Emx1Q04742 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Emx1Q04742 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Emx1Q04742 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Emx1Q04742 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Emx1Q04742 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Emx1Q04742 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Emx1Q04742 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Emx1Q04742 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Emx1Q04742 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Emx1Q04742 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Emx1Q04742 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Emx1Q04742 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Emx1Q04742 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
Emx1Q04742 Gm26833-201ENSMUST00000180899 440 ntBASIC17.25■□□□□ 0.35
Emx1Q04742 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.25■□□□□ 0.35
Emx1Q04742 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
Emx1Q04742 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Emx1Q04742 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Emx1Q04742 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Emx1Q04742 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Emx1Q04742 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Emx1Q04742 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Emx1Q04742 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Emx1Q04742 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Emx1Q04742 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Emx1Q04742 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.24■□□□□ 0.35
Emx1Q04742 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Emx1Q04742 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.24■□□□□ 0.35
Emx1Q04742 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Emx1Q04742 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Emx1Q04742 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Emx1Q04742 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Emx1Q04742 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Emx1Q04742 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms