Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Smad5P97454 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smad5P97454 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smad5P97454 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smad5P97454 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smad5P97454 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smad5P97454 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smad5P97454 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Smad5P97454 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Smad5P97454 Nespas-201ENSMUST00000143738 1083 ntBASIC17.65■□□□□ 0.42
Smad5P97454 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.65■□□□□ 0.42
Smad5P97454 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.65■□□□□ 0.42
Smad5P97454 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smad5P97454 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smad5P97454 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smad5P97454 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smad5P97454 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Smad5P97454 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smad5P97454 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smad5P97454 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smad5P97454 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smad5P97454 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smad5P97454 Gm7290-201ENSMUST00000104990 617 ntBASIC17.64■□□□□ 0.41
Smad5P97454 Gm12918-201ENSMUST00000120234 636 ntBASIC17.64■□□□□ 0.41
Smad5P97454 Gm15710-201ENSMUST00000121821 636 ntBASIC17.64■□□□□ 0.41
Smad5P97454 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Smad5P97454 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smad5P97454 Gm5075-201ENSMUST00000196916 622 ntBASIC17.64■□□□□ 0.41
Smad5P97454 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smad5P97454 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.64■□□□□ 0.41
Smad5P97454 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.64■□□□□ 0.41
Smad5P97454 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smad5P97454 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smad5P97454 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smad5P97454 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smad5P97454 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smad5P97454 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smad5P97454 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smad5P97454 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smad5P97454 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smad5P97454 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
Smad5P97454 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smad5P97454 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smad5P97454 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.63■□□□□ 0.41
Smad5P97454 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smad5P97454 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smad5P97454 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smad5P97454 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smad5P97454 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Smad5P97454 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smad5P97454 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smad5P97454 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smad5P97454 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Smad5P97454 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smad5P97454 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Smad5P97454 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smad5P97454 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smad5P97454 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.62■□□□□ 0.41
Smad5P97454 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.62■□□□□ 0.41
Smad5P97454 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smad5P97454 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smad5P97454 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smad5P97454 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smad5P97454 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smad5P97454 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smad5P97454 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smad5P97454 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smad5P97454 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.61■□□□□ 0.41
Smad5P97454 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.61■□□□□ 0.41
Smad5P97454 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Smad5P97454 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.61■□□□□ 0.41
Smad5P97454 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Smad5P97454 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.61■□□□□ 0.41
Smad5P97454 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Smad5P97454 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Gm10653-202ENSMUST00000139570 835 ntBASIC17.61■□□□□ 0.41
Smad5P97454 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.61■□□□□ 0.41
Smad5P97454 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Smad5P97454 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Smad5P97454 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smad5P97454 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smad5P97454 Golph3-205ENSMUST00000228671 2842 ntBASIC17.6■□□□□ 0.41
Smad5P97454 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smad5P97454 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms