Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cdh6P97326 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.86■□□□□ 0.61
Cdh6P97326 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cdh6P97326 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Golph3-205ENSMUST00000228671 2842 ntBASIC18.86■□□□□ 0.61
Cdh6P97326 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cdh6P97326 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.85■□□□□ 0.61
Cdh6P97326 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh6P97326 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh6P97326 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cdh6P97326 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh6P97326 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh6P97326 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh6P97326 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh6P97326 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh6P97326 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cdh6P97326 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh6P97326 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh6P97326 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.85■□□□□ 0.61
Cdh6P97326 Gm7291-201ENSMUST00000199147 382 ntBASIC18.85■□□□□ 0.61
Cdh6P97326 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh6P97326 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cdh6P97326 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Cdh6P97326 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh6P97326 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh6P97326 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh6P97326 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh6P97326 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh6P97326 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh6P97326 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh6P97326 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh6P97326 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh6P97326 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh6P97326 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh6P97326 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cdh6P97326 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh6P97326 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh6P97326 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.84■□□□□ 0.61
Cdh6P97326 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh6P97326 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh6P97326 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cdh6P97326 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.84■□□□□ 0.61
Cdh6P97326 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh6P97326 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh6P97326 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
Cdh6P97326 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.83■□□□□ 0.6
Cdh6P97326 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.83■□□□□ 0.6
Cdh6P97326 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Cdh6P97326 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.83■□□□□ 0.6
Cdh6P97326 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh6P97326 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh6P97326 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh6P97326 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh6P97326 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh6P97326 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh6P97326 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh6P97326 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.82■□□□□ 0.6
Cdh6P97326 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.82■□□□□ 0.6
Cdh6P97326 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh6P97326 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh6P97326 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh6P97326 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh6P97326 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Cdh6P97326 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.82■□□□□ 0.6
Cdh6P97326 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh6P97326 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cdh6P97326 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh6P97326 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh6P97326 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh6P97326 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh6P97326 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh6P97326 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.81■□□□□ 0.6
Cdh6P97326 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh6P97326 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh6P97326 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh6P97326 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
Cdh6P97326 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.81■□□□□ 0.6
Cdh6P97326 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh6P97326 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh6P97326 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh6P97326 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh6P97326 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh6P97326 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh6P97326 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cdh6P97326 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh6P97326 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh6P97326 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh6P97326 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh6P97326 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh6P97326 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh6P97326 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh6P97326 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cdh6P97326 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh6P97326 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.8■□□□□ 0.6
Cdh6P97326 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms