Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
H3f3aP84244 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H3f3aP84244 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H3f3aP84244 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
H3f3aP84244 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.55■□□□□ 0.24
H3f3aP84244 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.55■□□□□ 0.24
H3f3aP84244 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.55■□□□□ 0.24
H3f3aP84244 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
H3f3aP84244 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H3f3aP84244 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H3f3aP84244 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
H3f3aP84244 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H3f3aP84244 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
H3f3aP84244 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.55■□□□□ 0.24
H3f3aP84244 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H3f3aP84244 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
H3f3aP84244 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H3f3aP84244 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H3f3aP84244 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
H3f3aP84244 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.55■□□□□ 0.24
H3f3aP84244 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
H3f3aP84244 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3f3aP84244 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3f3aP84244 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3f3aP84244 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
H3f3aP84244 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.54■□□□□ 0.24
H3f3aP84244 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
H3f3aP84244 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
H3f3aP84244 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.54■□□□□ 0.24
H3f3aP84244 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3f3aP84244 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3f3aP84244 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3f3aP84244 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.54■□□□□ 0.24
H3f3aP84244 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3f3aP84244 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3f3aP84244 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3f3aP84244 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3f3aP84244 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
H3f3aP84244 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.53■□□□□ 0.24
H3f3aP84244 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.53■□□□□ 0.24
H3f3aP84244 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.53■□□□□ 0.24
H3f3aP84244 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H3f3aP84244 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
H3f3aP84244 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.52■□□□□ 0.24
H3f3aP84244 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H3f3aP84244 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H3f3aP84244 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
H3f3aP84244 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
H3f3aP84244 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.52■□□□□ 0.24
H3f3aP84244 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.52■□□□□ 0.24
H3f3aP84244 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
H3f3aP84244 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H3f3aP84244 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.52■□□□□ 0.23
H3f3aP84244 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.52■□□□□ 0.23
H3f3aP84244 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
H3f3aP84244 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
H3f3aP84244 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
H3f3aP84244 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
H3f3aP84244 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H3f3aP84244 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.51■□□□□ 0.23
H3f3aP84244 Gm7290-201ENSMUST00000104990 617 ntBASIC16.51■□□□□ 0.23
H3f3aP84244 Gm12918-201ENSMUST00000120234 636 ntBASIC16.51■□□□□ 0.23
H3f3aP84244 Gm15710-201ENSMUST00000121821 636 ntBASIC16.51■□□□□ 0.23
H3f3aP84244 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.51■□□□□ 0.23
H3f3aP84244 Gm5075-201ENSMUST00000196916 622 ntBASIC16.51■□□□□ 0.23
H3f3aP84244 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.51■□□□□ 0.23
H3f3aP84244 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.51■□□□□ 0.23
H3f3aP84244 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.51■□□□□ 0.23
H3f3aP84244 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
H3f3aP84244 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
H3f3aP84244 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
H3f3aP84244 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
H3f3aP84244 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.5■□□□□ 0.23
H3f3aP84244 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
H3f3aP84244 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H3f3aP84244 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
H3f3aP84244 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
H3f3aP84244 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.5■□□□□ 0.23
H3f3aP84244 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
H3f3aP84244 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
H3f3aP84244 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.5■□□□□ 0.23
H3f3aP84244 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.5■□□□□ 0.23
H3f3aP84244 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
H3f3aP84244 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms