Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp3P63024 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.39□□□□□ -0.11
Vamp3P63024 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
Vamp3P63024 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp3P63024 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp3P63024 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp3P63024 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp3P63024 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vamp3P63024 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp3P63024 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp3P63024 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp3P63024 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp3P63024 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp3P63024 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp3P63024 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp3P63024 Gm4799-201ENSMUST00000095396 657 ntBASIC14.38□□□□□ -0.11
Vamp3P63024 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp3P63024 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp3P63024 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp3P63024 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp3P63024 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vamp3P63024 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp3P63024 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp3P63024 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Vamp3P63024 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.37□□□□□ -0.11
Vamp3P63024 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vamp3P63024 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vamp3P63024 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Vamp3P63024 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp3P63024 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp3P63024 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp3P63024 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp3P63024 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp3P63024 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14.36□□□□□ -0.11
Vamp3P63024 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.36□□□□□ -0.11
Vamp3P63024 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vamp3P63024 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.36□□□□□ -0.11
Vamp3P63024 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp3P63024 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp3P63024 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp3P63024 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp3P63024 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.36□□□□□ -0.11
Vamp3P63024 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp3P63024 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.36□□□□□ -0.11
Vamp3P63024 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp3P63024 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp3P63024 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp3P63024 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp3P63024 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp3P63024 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp3P63024 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Vamp3P63024 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp3P63024 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp3P63024 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp3P63024 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp3P63024 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp3P63024 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp3P63024 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vamp3P63024 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp3P63024 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vamp3P63024 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp3P63024 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Vamp3P63024 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp3P63024 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vamp3P63024 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Vamp3P63024 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp3P63024 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp3P63024 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.34□□□□□ -0.11
Vamp3P63024 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp3P63024 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vamp3P63024 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp3P63024 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp3P63024 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp3P63024 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Vamp3P63024 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Vamp3P63024 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.34□□□□□ -0.11
Vamp3P63024 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp3P63024 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp3P63024 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.34□□□□□ -0.11
Vamp3P63024 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vamp3P63024 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp3P63024 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp3P63024 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vamp3P63024 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms