Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup43P59235 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup43P59235 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup43P59235 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup43P59235 Gm37179-201ENSMUST00000194862 823 ntBASIC17.57■□□□□ 0.4
Nup43P59235 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup43P59235 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup43P59235 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup43P59235 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup43P59235 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Nup43P59235 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nup43P59235 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup43P59235 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup43P59235 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.56■□□□□ 0.4
Nup43P59235 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nup43P59235 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Nup43P59235 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup43P59235 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup43P59235 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.56■□□□□ 0.4
Nup43P59235 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nup43P59235 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup43P59235 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Nup43P59235 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup43P59235 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup43P59235 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup43P59235 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nup43P59235 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nup43P59235 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup43P59235 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup43P59235 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup43P59235 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.55■□□□□ 0.4
Nup43P59235 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup43P59235 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.55■□□□□ 0.4
Nup43P59235 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Nup43P59235 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.55■□□□□ 0.4
Nup43P59235 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup43P59235 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nup43P59235 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup43P59235 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nup43P59235 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nup43P59235 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup43P59235 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup43P59235 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nup43P59235 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nup43P59235 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.55■□□□□ 0.4
Nup43P59235 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nup43P59235 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup43P59235 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup43P59235 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup43P59235 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup43P59235 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup43P59235 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nup43P59235 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup43P59235 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nup43P59235 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.54■□□□□ 0.4
Nup43P59235 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.54■□□□□ 0.4
Nup43P59235 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup43P59235 Gm6365-201ENSMUST00000054711 744 ntBASIC17.54■□□□□ 0.4
Nup43P59235 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup43P59235 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
Nup43P59235 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup43P59235 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Nup43P59235 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup43P59235 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nup43P59235 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup43P59235 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup43P59235 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nup43P59235 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nup43P59235 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup43P59235 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.53■□□□□ 0.4
Nup43P59235 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.53■□□□□ 0.4
Nup43P59235 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nup43P59235 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nup43P59235 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nup43P59235 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nup43P59235 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup43P59235 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup43P59235 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.53■□□□□ 0.4
Nup43P59235 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup43P59235 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Nup43P59235 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Nup43P59235 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.52■□□□□ 0.4
Nup43P59235 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup43P59235 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup43P59235 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup43P59235 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup43P59235 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup43P59235 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup43P59235 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup43P59235 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nup43P59235 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.52■□□□□ 0.4
Nup43P59235 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nup43P59235 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup43P59235 Golph3-205ENSMUST00000228671 2842 ntBASIC17.52■□□□□ 0.39
Nup43P59235 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Nup43P59235 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup43P59235 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup43P59235 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup43P59235 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup43P59235 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms