Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Tpm1P58771 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm1P58771 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm1P58771 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.75■□□□□ 0.91
Tpm1P58771 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm1P58771 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm1P58771 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm1P58771 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.75■□□□□ 0.91
Tpm1P58771 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.75■□□□□ 0.91
Tpm1P58771 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm1P58771 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm1P58771 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.75■□□□□ 0.91
Tpm1P58771 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm1P58771 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm1P58771 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.74■□□□□ 0.91
Tpm1P58771 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.74■□□□□ 0.91
Tpm1P58771 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm1P58771 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm1P58771 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm1P58771 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm1P58771 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm1P58771 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm1P58771 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm1P58771 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm1P58771 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.73■□□□□ 0.91
Tpm1P58771 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm1P58771 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Tpm1P58771 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm1P58771 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm1P58771 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm1P58771 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Tpm1P58771 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm1P58771 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm1P58771 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm1P58771 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm1P58771 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tpm1P58771 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm1P58771 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm1P58771 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.72■□□□□ 0.91
Tpm1P58771 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Tpm1P58771 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm1P58771 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm1P58771 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm1P58771 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm1P58771 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm1P58771 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm1P58771 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Tpm1P58771 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Tpm1P58771 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm1P58771 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm1P58771 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm1P58771 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.7■□□□□ 0.9
Tpm1P58771 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm1P58771 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm1P58771 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.7■□□□□ 0.9
Tpm1P58771 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm1P58771 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.7■□□□□ 0.9
Tpm1P58771 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Tpm1P58771 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
Tpm1P58771 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm1P58771 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm1P58771 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm1P58771 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Tpm1P58771 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm1P58771 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm1P58771 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm1P58771 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm1P58771 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm1P58771 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm1P58771 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm1P58771 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm1P58771 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm1P58771 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Tpm1P58771 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm1P58771 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm1P58771 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm1P58771 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Tpm1P58771 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.68■□□□□ 0.9
Tpm1P58771 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm1P58771 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm1P58771 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Tpm1P58771 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm1P58771 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Tpm1P58771 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm1P58771 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm1P58771 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm1P58771 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm1P58771 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm1P58771 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm1P58771 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm1P58771 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Tpm1P58771 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Tpm1P58771 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.67■□□□□ 0.9
Tpm1P58771 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm1P58771 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm1P58771 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm1P58771 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm1P58771 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm1P58771 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm1P58771 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms