Protein–RNA interactions for Protein: P58242

Smpdl3b, Acid sphingomyelinase-like phosphodiesterase 3b, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpdl3bP58242 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smpdl3bP58242 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smpdl3bP58242 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.83■□□□□ 0.6
Smpdl3bP58242 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Smpdl3bP58242 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smpdl3bP58242 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Smpdl3bP58242 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smpdl3bP58242 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smpdl3bP58242 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Smpdl3bP58242 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smpdl3bP58242 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smpdl3bP58242 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Smpdl3bP58242 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smpdl3bP58242 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smpdl3bP58242 Gm29257-201ENSMUST00000186115 639 ntBASIC18.82■□□□□ 0.6
Smpdl3bP58242 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smpdl3bP58242 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smpdl3bP58242 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smpdl3bP58242 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Smpdl3bP58242 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smpdl3bP58242 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smpdl3bP58242 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smpdl3bP58242 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Gm7290-201ENSMUST00000104990 617 ntBASIC18.81■□□□□ 0.6
Smpdl3bP58242 Gm12918-201ENSMUST00000120234 636 ntBASIC18.81■□□□□ 0.6
Smpdl3bP58242 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Gm15710-201ENSMUST00000121821 636 ntBASIC18.81■□□□□ 0.6
Smpdl3bP58242 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Gm5075-201ENSMUST00000196916 622 ntBASIC18.81■□□□□ 0.6
Smpdl3bP58242 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.81■□□□□ 0.6
Smpdl3bP58242 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.81■□□□□ 0.6
Smpdl3bP58242 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Gm10602-201ENSMUST00000098239 609 ntBASIC18.81■□□□□ 0.6
Smpdl3bP58242 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpdl3bP58242 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smpdl3bP58242 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smpdl3bP58242 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smpdl3bP58242 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smpdl3bP58242 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smpdl3bP58242 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.8■□□□□ 0.6
Smpdl3bP58242 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smpdl3bP58242 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smpdl3bP58242 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.8■□□□□ 0.6
Smpdl3bP58242 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Smpdl3bP58242 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.8■□□□□ 0.6
Smpdl3bP58242 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Smpdl3bP58242 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smpdl3bP58242 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.8■□□□□ 0.6
Smpdl3bP58242 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Smpdl3bP58242 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smpdl3bP58242 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smpdl3bP58242 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smpdl3bP58242 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smpdl3bP58242 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smpdl3bP58242 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smpdl3bP58242 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.79■□□□□ 0.6
Smpdl3bP58242 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smpdl3bP58242 Gm6211-202ENSMUST00000167849 925 ntBASIC18.79■□□□□ 0.6
Smpdl3bP58242 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smpdl3bP58242 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smpdl3bP58242 BC021767-201ENSMUST00000126387 1716 ntBASIC18.79■□□□□ 0.6
Smpdl3bP58242 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smpdl3bP58242 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smpdl3bP58242 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smpdl3bP58242 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smpdl3bP58242 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smpdl3bP58242 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smpdl3bP58242 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smpdl3bP58242 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smpdl3bP58242 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Smpdl3bP58242 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smpdl3bP58242 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.78■□□□□ 0.6
Smpdl3bP58242 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Smpdl3bP58242 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smpdl3bP58242 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smpdl3bP58242 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smpdl3bP58242 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smpdl3bP58242 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smpdl3bP58242 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.77■□□□□ 0.6
Smpdl3bP58242 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smpdl3bP58242 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms