Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rrp1P56183 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rrp1P56183 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rrp1P56183 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Rrp1P56183 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rrp1P56183 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rrp1P56183 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rrp1P56183 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rrp1P56183 Gm27454-201ENSMUST00000185090 204 ntBASIC20.96■□□□□ 0.95
Rrp1P56183 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rrp1P56183 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.96■□□□□ 0.95
Rrp1P56183 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rrp1P56183 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rrp1P56183 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rrp1P56183 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rrp1P56183 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rrp1P56183 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rrp1P56183 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.95■□□□□ 0.94
Rrp1P56183 Mir7075-201ENSMUST00000184187 82 ntBASIC20.95■□□□□ 0.94
Rrp1P56183 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.95■□□□□ 0.94
Rrp1P56183 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rrp1P56183 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.95■□□□□ 0.94
Rrp1P56183 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rrp1P56183 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rrp1P56183 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Rrp1P56183 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rrp1P56183 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rrp1P56183 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rrp1P56183 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rrp1P56183 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rrp1P56183 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rrp1P56183 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rrp1P56183 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.94■□□□□ 0.94
Rrp1P56183 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Rrp1P56183 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rrp1P56183 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rrp1P56183 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rrp1P56183 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.94■□□□□ 0.94
Rrp1P56183 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rrp1P56183 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rrp1P56183 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rrp1P56183 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.93■□□□□ 0.94
Rrp1P56183 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rrp1P56183 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rrp1P56183 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rrp1P56183 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.93■□□□□ 0.94
Rrp1P56183 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rrp1P56183 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rrp1P56183 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.93■□□□□ 0.94
Rrp1P56183 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Rrp1P56183 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rrp1P56183 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rrp1P56183 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rrp1P56183 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rrp1P56183 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rrp1P56183 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.92■□□□□ 0.94
Rrp1P56183 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rrp1P56183 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rrp1P56183 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rrp1P56183 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rrp1P56183 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rrp1P56183 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rrp1P56183 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rrp1P56183 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rrp1P56183 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rrp1P56183 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rrp1P56183 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rrp1P56183 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Rrp1P56183 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Rrp1P56183 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.91■□□□□ 0.94
Rrp1P56183 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rrp1P56183 Gm45417-201ENSMUST00000209533 758 ntBASIC20.91■□□□□ 0.94
Rrp1P56183 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rrp1P56183 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rrp1P56183 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rrp1P56183 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Rrp1P56183 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
Rrp1P56183 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rrp1P56183 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rrp1P56183 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rrp1P56183 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rrp1P56183 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rrp1P56183 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rrp1P56183 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rrp1P56183 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rrp1P56183 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rrp1P56183 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rrp1P56183 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rrp1P56183 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rrp1P56183 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rrp1P56183 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rrp1P56183 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Rrp1P56183 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Rrp1P56183 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rrp1P56183 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rrp1P56183 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Rrp1P56183 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Rrp1P56183 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rrp1P56183 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Rrp1P56183 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms