Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.81■□□□□ 0.76
NrlP54846 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NrlP54846 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NrlP54846 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NrlP54846 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NrlP54846 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NrlP54846 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NrlP54846 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NrlP54846 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NrlP54846 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
NrlP54846 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NrlP54846 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NrlP54846 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NrlP54846 Gm6576-201ENSMUST00000169678 883 ntBASIC19.8■□□□□ 0.76
NrlP54846 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.8■□□□□ 0.76
NrlP54846 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.8■□□□□ 0.76
NrlP54846 Iqck-206ENSMUST00000208658 2891 ntBASIC19.8■□□□□ 0.76
NrlP54846 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NrlP54846 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.79■□□□□ 0.76
NrlP54846 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.79■□□□□ 0.76
NrlP54846 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NrlP54846 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NrlP54846 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.79■□□□□ 0.76
NrlP54846 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.79■□□□□ 0.76
NrlP54846 Gm44549-201ENSMUST00000208351 577 ntBASIC19.79■□□□□ 0.76
NrlP54846 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NrlP54846 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NrlP54846 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NrlP54846 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.79■□□□□ 0.76
NrlP54846 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NrlP54846 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NrlP54846 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NrlP54846 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NrlP54846 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NrlP54846 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.78■□□□□ 0.76
NrlP54846 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NrlP54846 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NrlP54846 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NrlP54846 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NrlP54846 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NrlP54846 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NrlP54846 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.77■□□□□ 0.76
NrlP54846 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NrlP54846 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.77■□□□□ 0.76
NrlP54846 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NrlP54846 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NrlP54846 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NrlP54846 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
NrlP54846 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NrlP54846 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NrlP54846 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NrlP54846 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NrlP54846 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.76■□□□□ 0.75
NrlP54846 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NrlP54846 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.76■□□□□ 0.75
NrlP54846 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NrlP54846 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NrlP54846 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NrlP54846 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NrlP54846 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NrlP54846 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NrlP54846 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NrlP54846 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NrlP54846 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NrlP54846 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NrlP54846 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NrlP54846 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.75■□□□□ 0.75
NrlP54846 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.75■□□□□ 0.75
NrlP54846 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NrlP54846 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.75■□□□□ 0.75
NrlP54846 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NrlP54846 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NrlP54846 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NrlP54846 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NrlP54846 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NrlP54846 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NrlP54846 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NrlP54846 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.74■□□□□ 0.75
NrlP54846 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NrlP54846 Gm11249-201ENSMUST00000117071 859 ntBASIC19.74■□□□□ 0.75
NrlP54846 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
NrlP54846 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NrlP54846 Gm18666-201ENSMUST00000190039 958 ntBASIC19.74■□□□□ 0.75
NrlP54846 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NrlP54846 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NrlP54846 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.74■□□□□ 0.75
NrlP54846 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
NrlP54846 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.74■□□□□ 0.75
NrlP54846 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.73■□□□□ 0.75
NrlP54846 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NrlP54846 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NrlP54846 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NrlP54846 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NrlP54846 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.73■□□□□ 0.75
NrlP54846 Gm7977-201ENSMUST00000193787 748 ntBASIC19.73■□□□□ 0.75
NrlP54846 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.73■□□□□ 0.75
NrlP54846 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NrlP54846 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NrlP54846 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NrlP54846 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms