Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.09■□□□□ 0.65
Sox1P53783 Gm42545-201ENSMUST00000202755 922 ntBASIC19.09■□□□□ 0.65
Sox1P53783 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox1P53783 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox1P53783 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox1P53783 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox1P53783 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox1P53783 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sox1P53783 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox1P53783 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Sox1P53783 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Sox1P53783 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sox1P53783 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sox1P53783 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sox1P53783 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.08■□□□□ 0.64
Sox1P53783 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sox1P53783 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sox1P53783 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sox1P53783 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sox1P53783 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sox1P53783 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox1P53783 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sox1P53783 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox1P53783 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox1P53783 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox1P53783 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox1P53783 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.07■□□□□ 0.64
Sox1P53783 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.07■□□□□ 0.64
Sox1P53783 Gm18025-201ENSMUST00000221733 862 ntBASIC19.07■□□□□ 0.64
Sox1P53783 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Sox1P53783 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox1P53783 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox1P53783 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sox1P53783 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Sox1P53783 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox1P53783 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sox1P53783 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sox1P53783 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox1P53783 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox1P53783 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox1P53783 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox1P53783 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox1P53783 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Sox1P53783 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox1P53783 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.05■□□□□ 0.64
Sox1P53783 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox1P53783 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Sox1P53783 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox1P53783 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.05■□□□□ 0.64
Sox1P53783 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.05■□□□□ 0.64
Sox1P53783 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Sox1P53783 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Sox1P53783 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox1P53783 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox1P53783 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox1P53783 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox1P53783 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.04■□□□□ 0.64
Sox1P53783 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox1P53783 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.04■□□□□ 0.64
Sox1P53783 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.04■□□□□ 0.64
Sox1P53783 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.04■□□□□ 0.64
Sox1P53783 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Sox1P53783 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox1P53783 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox1P53783 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox1P53783 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sox1P53783 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox1P53783 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.03■□□□□ 0.64
Sox1P53783 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Sox1P53783 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Sox1P53783 Gm37292-201ENSMUST00000192062 758 ntBASIC19.03■□□□□ 0.64
Sox1P53783 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sox1P53783 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Sox1P53783 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox1P53783 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox1P53783 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox1P53783 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox1P53783 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox1P53783 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.02■□□□□ 0.64
Sox1P53783 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.02■□□□□ 0.64
Sox1P53783 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.02■□□□□ 0.64
Sox1P53783 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Sox1P53783 Gm27704-201ENSMUST00000185094 107 ntBASIC19.02■□□□□ 0.64
Sox1P53783 Gm6443-201ENSMUST00000203599 874 ntBASIC19.02■□□□□ 0.64
Sox1P53783 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.02■□□□□ 0.64
Sox1P53783 Mzt1-203ENSMUST00000227948 952 ntBASIC19.02■□□□□ 0.64
Sox1P53783 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox1P53783 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox1P53783 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox1P53783 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox1P53783 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sox1P53783 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sox1P53783 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox1P53783 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox1P53783 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox1P53783 Mir5130-201ENSMUST00000175160 84 ntBASIC19.01■□□□□ 0.63
Sox1P53783 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.01■□□□□ 0.63
Sox1P53783 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Sox1P53783 Gm17807-201ENSMUST00000186869 298 ntBASIC19.01■□□□□ 0.63
Sox1P53783 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms