Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmga2P52927 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Hmga2P52927 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Hmga2P52927 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmga2P52927 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmga2P52927 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmga2P52927 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga2P52927 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga2P52927 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga2P52927 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga2P52927 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga2P52927 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga2P52927 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Hmga2P52927 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga2P52927 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga2P52927 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga2P52927 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Hmga2P52927 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Hmga2P52927 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Hmga2P52927 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga2P52927 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga2P52927 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.8■□□□□ 0.12
Hmga2P52927 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga2P52927 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga2P52927 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga2P52927 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Hmga2P52927 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga2P52927 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmga2P52927 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga2P52927 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga2P52927 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga2P52927 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga2P52927 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga2P52927 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga2P52927 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga2P52927 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga2P52927 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Hmga2P52927 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga2P52927 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.79■□□□□ 0.12
Hmga2P52927 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga2P52927 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga2P52927 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga2P52927 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga2P52927 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga2P52927 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.79■□□□□ 0.12
Hmga2P52927 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
Hmga2P52927 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga2P52927 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmga2P52927 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Hmga2P52927 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hmga2P52927 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hmga2P52927 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hmga2P52927 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmga2P52927 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.78■□□□□ 0.12
Hmga2P52927 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hmga2P52927 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmga2P52927 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmga2P52927 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.78■□□□□ 0.12
Hmga2P52927 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.78■□□□□ 0.12
Hmga2P52927 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Hmga2P52927 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Hmga2P52927 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.78■□□□□ 0.12
Hmga2P52927 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga2P52927 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga2P52927 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga2P52927 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Hmga2P52927 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga2P52927 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga2P52927 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga2P52927 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Hmga2P52927 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga2P52927 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga2P52927 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga2P52927 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga2P52927 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga2P52927 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga2P52927 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga2P52927 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.77■□□□□ 0.12
Hmga2P52927 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Hmga2P52927 Spcs1-204ENSMUST00000226782 949 ntBASIC15.77■□□□□ 0.12
Hmga2P52927 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmga2P52927 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.77■□□□□ 0.12
Hmga2P52927 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hmga2P52927 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hmga2P52927 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hmga2P52927 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hmga2P52927 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.77■□□□□ 0.11
Hmga2P52927 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hmga2P52927 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Hmga2P52927 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.77■□□□□ 0.11
Hmga2P52927 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Hmga2P52927 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hmga2P52927 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.76■□□□□ 0.11
Hmga2P52927 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Hmga2P52927 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hmga2P52927 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Hmga2P52927 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmga2P52927 Gm12922-201ENSMUST00000120626 809 ntBASIC15.76■□□□□ 0.11
Hmga2P52927 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.76■□□□□ 0.11
Hmga2P52927 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms