Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SqleP52019 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.3■□□□□ 0.84
SqleP52019 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SqleP52019 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
SqleP52019 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SqleP52019 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SqleP52019 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SqleP52019 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SqleP52019 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SqleP52019 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SqleP52019 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.29■□□□□ 0.84
SqleP52019 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SqleP52019 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SqleP52019 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SqleP52019 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SqleP52019 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SqleP52019 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SqleP52019 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SqleP52019 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SqleP52019 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SqleP52019 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.28■□□□□ 0.84
SqleP52019 Gm14859-201ENSMUST00000117752 357 ntBASIC20.28■□□□□ 0.84
SqleP52019 Gm42545-201ENSMUST00000202755 922 ntBASIC20.28■□□□□ 0.84
SqleP52019 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SqleP52019 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SqleP52019 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SqleP52019 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SqleP52019 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SqleP52019 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SqleP52019 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SqleP52019 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SqleP52019 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SqleP52019 Gm12382-201ENSMUST00000122005 922 ntBASIC20.27■□□□□ 0.84
SqleP52019 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.27■□□□□ 0.84
SqleP52019 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SqleP52019 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.27■□□□□ 0.84
SqleP52019 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SqleP52019 Zfp783-201ENSMUST00000095946 670 ntBASIC20.27■□□□□ 0.84
SqleP52019 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SqleP52019 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SqleP52019 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SqleP52019 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SqleP52019 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SqleP52019 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SqleP52019 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SqleP52019 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.26■□□□□ 0.83
SqleP52019 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SqleP52019 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SqleP52019 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.26■□□□□ 0.83
SqleP52019 Gm15375-201ENSMUST00000119510 849 ntBASIC20.26■□□□□ 0.83
SqleP52019 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SqleP52019 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.26■□□□□ 0.83
SqleP52019 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SqleP52019 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.26■□□□□ 0.83
SqleP52019 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SqleP52019 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
SqleP52019 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SqleP52019 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SqleP52019 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SqleP52019 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SqleP52019 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SqleP52019 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SqleP52019 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SqleP52019 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
SqleP52019 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SqleP52019 Ank2-226ENSMUST00000189368 339 ntBASIC20.25■□□□□ 0.83
SqleP52019 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.25■□□□□ 0.83
SqleP52019 Gm18032-201ENSMUST00000222541 538 ntBASIC20.25■□□□□ 0.83
SqleP52019 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SqleP52019 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SqleP52019 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
SqleP52019 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SqleP52019 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SqleP52019 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SqleP52019 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SqleP52019 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SqleP52019 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.24■□□□□ 0.83
SqleP52019 Gm37292-201ENSMUST00000192062 758 ntBASIC20.24■□□□□ 0.83
SqleP52019 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SqleP52019 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SqleP52019 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SqleP52019 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SqleP52019 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SqleP52019 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SqleP52019 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SqleP52019 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.23■□□□□ 0.83
SqleP52019 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
SqleP52019 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SqleP52019 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SqleP52019 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.23■□□□□ 0.83
SqleP52019 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SqleP52019 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.23■□□□□ 0.83
SqleP52019 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SqleP52019 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SqleP52019 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SqleP52019 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SqleP52019 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SqleP52019 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SqleP52019 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SqleP52019 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms