Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atoh1P48985 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atoh1P48985 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.17■□□□□ 0.98
Atoh1P48985 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.17■□□□□ 0.98
Atoh1P48985 Gm11539-201ENSMUST00000119837 557 ntBASIC21.17■□□□□ 0.98
Atoh1P48985 Gm13436-201ENSMUST00000120418 567 ntBASIC21.17■□□□□ 0.98
Atoh1P48985 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atoh1P48985 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.17■□□□□ 0.98
Atoh1P48985 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.17■□□□□ 0.98
Atoh1P48985 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atoh1P48985 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atoh1P48985 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atoh1P48985 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atoh1P48985 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atoh1P48985 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Atoh1P48985 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atoh1P48985 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atoh1P48985 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Atoh1P48985 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atoh1P48985 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.16■□□□□ 0.98
Atoh1P48985 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Atoh1P48985 Gm6659-201ENSMUST00000174752 547 ntBASIC21.16■□□□□ 0.98
Atoh1P48985 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.16■□□□□ 0.98
Atoh1P48985 Gm18025-201ENSMUST00000221733 862 ntBASIC21.16■□□□□ 0.98
Atoh1P48985 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atoh1P48985 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Atoh1P48985 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atoh1P48985 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atoh1P48985 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atoh1P48985 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atoh1P48985 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Atoh1P48985 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atoh1P48985 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Atoh1P48985 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atoh1P48985 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atoh1P48985 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.15■□□□□ 0.98
Atoh1P48985 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Atoh1P48985 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Atoh1P48985 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Atoh1P48985 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Atoh1P48985 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atoh1P48985 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atoh1P48985 Gm42545-201ENSMUST00000202755 922 ntBASIC21.14■□□□□ 0.97
Atoh1P48985 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atoh1P48985 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atoh1P48985 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atoh1P48985 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Atoh1P48985 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atoh1P48985 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atoh1P48985 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.13■□□□□ 0.97
Atoh1P48985 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atoh1P48985 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atoh1P48985 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atoh1P48985 Gm7889-201ENSMUST00000185591 958 ntBASIC21.13■□□□□ 0.97
Atoh1P48985 Odf3b-204ENSMUST00000227834 930 ntBASIC21.13■□□□□ 0.97
Atoh1P48985 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atoh1P48985 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Atoh1P48985 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atoh1P48985 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atoh1P48985 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.13■□□□□ 0.97
Atoh1P48985 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Atoh1P48985 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atoh1P48985 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atoh1P48985 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.12■□□□□ 0.97
Atoh1P48985 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Atoh1P48985 Gm15375-201ENSMUST00000119510 849 ntBASIC21.12■□□□□ 0.97
Atoh1P48985 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atoh1P48985 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Atoh1P48985 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Atoh1P48985 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.12■□□□□ 0.97
Atoh1P48985 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atoh1P48985 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Atoh1P48985 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Atoh1P48985 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atoh1P48985 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.11■□□□□ 0.97
Atoh1P48985 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atoh1P48985 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atoh1P48985 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atoh1P48985 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Atoh1P48985 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Atoh1P48985 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atoh1P48985 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atoh1P48985 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Atoh1P48985 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Atoh1P48985 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atoh1P48985 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atoh1P48985 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atoh1P48985 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atoh1P48985 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.09■□□□□ 0.97
Atoh1P48985 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.09■□□□□ 0.97
Atoh1P48985 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atoh1P48985 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Atoh1P48985 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.09■□□□□ 0.97
Atoh1P48985 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.09■□□□□ 0.97
Atoh1P48985 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atoh1P48985 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.09■□□□□ 0.97
Atoh1P48985 Timm23-208ENSMUST00000226683 750 ntBASIC21.09■□□□□ 0.97
Atoh1P48985 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atoh1P48985 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Atoh1P48985 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms