Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HttP42859 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HttP42859 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HttP42859 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HttP42859 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HttP42859 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HttP42859 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.15■□□□□ 0.82
HttP42859 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HttP42859 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HttP42859 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HttP42859 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HttP42859 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.15■□□□□ 0.82
HttP42859 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HttP42859 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.15■□□□□ 0.82
HttP42859 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HttP42859 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HttP42859 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HttP42859 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
HttP42859 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.14■□□□□ 0.82
HttP42859 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HttP42859 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HttP42859 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
HttP42859 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HttP42859 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HttP42859 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HttP42859 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
HttP42859 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HttP42859 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HttP42859 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HttP42859 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.13■□□□□ 0.81
HttP42859 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.13■□□□□ 0.81
HttP42859 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HttP42859 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HttP42859 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.13■□□□□ 0.81
HttP42859 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.13■□□□□ 0.81
HttP42859 Flg-201ENSMUST00000050758 1488 ntBASIC20.13■□□□□ 0.81
HttP42859 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.13■□□□□ 0.81
HttP42859 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HttP42859 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HttP42859 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HttP42859 Gm7153-201ENSMUST00000117092 455 ntBASIC20.12■□□□□ 0.81
HttP42859 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HttP42859 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HttP42859 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HttP42859 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HttP42859 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.12■□□□□ 0.81
HttP42859 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HttP42859 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HttP42859 Gm15375-201ENSMUST00000119510 849 ntBASIC20.11■□□□□ 0.81
HttP42859 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HttP42859 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HttP42859 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HttP42859 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HttP42859 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HttP42859 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HttP42859 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HttP42859 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HttP42859 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
HttP42859 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HttP42859 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HttP42859 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.1■□□□□ 0.81
HttP42859 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HttP42859 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HttP42859 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HttP42859 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HttP42859 Gm37292-201ENSMUST00000192062 758 ntBASIC20.1■□□□□ 0.81
HttP42859 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HttP42859 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HttP42859 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
HttP42859 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
HttP42859 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HttP42859 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HttP42859 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HttP42859 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HttP42859 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HttP42859 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HttP42859 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HttP42859 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HttP42859 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HttP42859 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HttP42859 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.08■□□□□ 0.8
HttP42859 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HttP42859 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.08■□□□□ 0.8
HttP42859 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.08■□□□□ 0.8
HttP42859 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HttP42859 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
HttP42859 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HttP42859 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.07■□□□□ 0.8
HttP42859 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.07■□□□□ 0.8
HttP42859 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HttP42859 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
HttP42859 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.06■□□□□ 0.8
HttP42859 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HttP42859 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HttP42859 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HttP42859 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HttP42859 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HttP42859 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HttP42859 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HttP42859 Gm22697-201ENSMUST00000175194 63 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms