Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh4P39038 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh4P39038 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh4P39038 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh4P39038 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh4P39038 Gm12933-201ENSMUST00000120203 872 ntBASIC17.76■□□□□ 0.43
Cdh4P39038 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.76■□□□□ 0.43
Cdh4P39038 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.76■□□□□ 0.43
Cdh4P39038 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.76■□□□□ 0.43
Cdh4P39038 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.76■□□□□ 0.43
Cdh4P39038 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Cdh4P39038 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh4P39038 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh4P39038 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh4P39038 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cdh4P39038 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh4P39038 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.76■□□□□ 0.43
Cdh4P39038 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh4P39038 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh4P39038 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cdh4P39038 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cdh4P39038 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.75■□□□□ 0.43
Cdh4P39038 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh4P39038 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh4P39038 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh4P39038 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.75■□□□□ 0.43
Cdh4P39038 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cdh4P39038 Gm6365-201ENSMUST00000054711 744 ntBASIC17.75■□□□□ 0.43
Cdh4P39038 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cdh4P39038 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh4P39038 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh4P39038 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh4P39038 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh4P39038 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh4P39038 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh4P39038 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cdh4P39038 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Cdh4P39038 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh4P39038 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh4P39038 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh4P39038 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.74■□□□□ 0.43
Cdh4P39038 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh4P39038 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh4P39038 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh4P39038 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh4P39038 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh4P39038 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh4P39038 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cdh4P39038 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cdh4P39038 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 Gm7290-201ENSMUST00000104990 617 ntBASIC17.73■□□□□ 0.43
Cdh4P39038 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 Gm12918-201ENSMUST00000120234 636 ntBASIC17.73■□□□□ 0.43
Cdh4P39038 Gm15710-201ENSMUST00000121821 636 ntBASIC17.73■□□□□ 0.43
Cdh4P39038 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
Cdh4P39038 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Cdh4P39038 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 Gm5075-201ENSMUST00000196916 622 ntBASIC17.73■□□□□ 0.43
Cdh4P39038 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.73■□□□□ 0.43
Cdh4P39038 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Cdh4P39038 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.73■□□□□ 0.43
Cdh4P39038 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.73■□□□□ 0.43
Cdh4P39038 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.73■□□□□ 0.43
Cdh4P39038 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh4P39038 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh4P39038 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh4P39038 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.72■□□□□ 0.43
Cdh4P39038 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh4P39038 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh4P39038 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh4P39038 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh4P39038 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh4P39038 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh4P39038 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.72■□□□□ 0.43
Cdh4P39038 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.72■□□□□ 0.43
Cdh4P39038 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh4P39038 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.72■□□□□ 0.43
Cdh4P39038 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh4P39038 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh4P39038 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cdh4P39038 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh4P39038 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh4P39038 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh4P39038 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh4P39038 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh4P39038 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh4P39038 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms