Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Thbs1P35441 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thbs1P35441 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Thbs1P35441 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
Thbs1P35441 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thbs1P35441 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.18■□□□□ 0.34
Thbs1P35441 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thbs1P35441 Gm5874-201ENSMUST00000096101 508 ntBASIC17.18■□□□□ 0.34
Thbs1P35441 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thbs1P35441 Reep4-203ENSMUST00000226563 1444 ntBASIC17.18■□□□□ 0.34
Thbs1P35441 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thbs1P35441 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
Thbs1P35441 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Thbs1P35441 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Thbs1P35441 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Thbs1P35441 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.17■□□□□ 0.34
Thbs1P35441 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Thbs1P35441 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Thbs1P35441 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.17■□□□□ 0.34
Thbs1P35441 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.17■□□□□ 0.34
Thbs1P35441 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.17■□□□□ 0.34
Thbs1P35441 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.17■□□□□ 0.34
Thbs1P35441 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
Thbs1P35441 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Thbs1P35441 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.16■□□□□ 0.34
Thbs1P35441 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thbs1P35441 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thbs1P35441 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thbs1P35441 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Thbs1P35441 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.16■□□□□ 0.34
Thbs1P35441 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thbs1P35441 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thbs1P35441 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.16■□□□□ 0.34
Thbs1P35441 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.16■□□□□ 0.34
Thbs1P35441 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Thbs1P35441 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thbs1P35441 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Thbs1P35441 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.16■□□□□ 0.34
Thbs1P35441 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thbs1P35441 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thbs1P35441 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thbs1P35441 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thbs1P35441 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thbs1P35441 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thbs1P35441 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Thbs1P35441 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Thbs1P35441 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Thbs1P35441 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Thbs1P35441 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thbs1P35441 Gm13534-201ENSMUST00000121169 513 ntBASIC17.15■□□□□ 0.34
Thbs1P35441 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.15■□□□□ 0.34
Thbs1P35441 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Thbs1P35441 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Thbs1P35441 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thbs1P35441 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thbs1P35441 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Thbs1P35441 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thbs1P35441 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thbs1P35441 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.14■□□□□ 0.34
Thbs1P35441 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thbs1P35441 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.14■□□□□ 0.33
Thbs1P35441 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Thbs1P35441 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Thbs1P35441 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thbs1P35441 Gm13234-201ENSMUST00000120010 747 ntBASIC17.14■□□□□ 0.33
Thbs1P35441 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Thbs1P35441 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.14■□□□□ 0.33
Thbs1P35441 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Thbs1P35441 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Thbs1P35441 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Thbs1P35441 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.14■□□□□ 0.33
Thbs1P35441 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.14■□□□□ 0.33
Thbs1P35441 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thbs1P35441 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thbs1P35441 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Thbs1P35441 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thbs1P35441 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Thbs1P35441 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.13■□□□□ 0.33
Thbs1P35441 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thbs1P35441 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thbs1P35441 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Thbs1P35441 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.13■□□□□ 0.33
Thbs1P35441 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Thbs1P35441 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms