Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nckap1P28660 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nckap1P28660 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Nckap1P28660 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nckap1P28660 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nckap1P28660 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Nckap1P28660 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nckap1P28660 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nckap1P28660 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nckap1P28660 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nckap1P28660 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nckap1P28660 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nckap1P28660 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nckap1P28660 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nckap1P28660 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Nckap1P28660 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.5■□□□□ 0.55
Nckap1P28660 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Nckap1P28660 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nckap1P28660 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nckap1P28660 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nckap1P28660 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Nckap1P28660 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Nckap1P28660 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.49■□□□□ 0.55
Nckap1P28660 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nckap1P28660 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nckap1P28660 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nckap1P28660 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nckap1P28660 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.49■□□□□ 0.55
Nckap1P28660 Gm27275-201ENSMUST00000184318 272 ntBASIC18.49■□□□□ 0.55
Nckap1P28660 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.49■□□□□ 0.55
Nckap1P28660 Gm44549-201ENSMUST00000208351 577 ntBASIC18.49■□□□□ 0.55
Nckap1P28660 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nckap1P28660 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nckap1P28660 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nckap1P28660 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nckap1P28660 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nckap1P28660 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nckap1P28660 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nckap1P28660 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nckap1P28660 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.48■□□□□ 0.55
Nckap1P28660 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.48■□□□□ 0.55
Nckap1P28660 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.48■□□□□ 0.55
Nckap1P28660 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nckap1P28660 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nckap1P28660 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nckap1P28660 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Nckap1P28660 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nckap1P28660 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nckap1P28660 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nckap1P28660 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nckap1P28660 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nckap1P28660 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nckap1P28660 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nckap1P28660 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nckap1P28660 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nckap1P28660 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nckap1P28660 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nckap1P28660 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nckap1P28660 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nckap1P28660 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Nckap1P28660 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nckap1P28660 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nckap1P28660 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nckap1P28660 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.46■□□□□ 0.55
Nckap1P28660 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.46■□□□□ 0.55
Nckap1P28660 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nckap1P28660 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nckap1P28660 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nckap1P28660 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Nckap1P28660 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Nckap1P28660 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Nckap1P28660 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.46■□□□□ 0.54
Nckap1P28660 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.46■□□□□ 0.54
Nckap1P28660 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nckap1P28660 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nckap1P28660 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nckap1P28660 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Nckap1P28660 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nckap1P28660 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nckap1P28660 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nckap1P28660 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Nckap1P28660 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nckap1P28660 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nckap1P28660 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nckap1P28660 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.45■□□□□ 0.54
Nckap1P28660 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nckap1P28660 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Nckap1P28660 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nckap1P28660 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Nckap1P28660 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nckap1P28660 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nckap1P28660 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nckap1P28660 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Nckap1P28660 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nckap1P28660 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nckap1P28660 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nckap1P28660 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.44■□□□□ 0.54
Nckap1P28660 Gm10252-201ENSMUST00000209541 832 ntBASIC18.44■□□□□ 0.54
Nckap1P28660 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nckap1P28660 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms