Protein–RNA interactions for Protein: P28236

Gja8, Gap junction alpha-8 protein, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja8P28236 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gja8P28236 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gja8P28236 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Gja8P28236 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gja8P28236 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gja8P28236 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gja8P28236 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gja8P28236 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gja8P28236 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.71■□□□□ 0.91
Gja8P28236 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Gja8P28236 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.71■□□□□ 0.91
Gja8P28236 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gja8P28236 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gja8P28236 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gja8P28236 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.7■□□□□ 0.9
Gja8P28236 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.7■□□□□ 0.9
Gja8P28236 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Gja8P28236 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gja8P28236 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gja8P28236 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gja8P28236 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Gja8P28236 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gja8P28236 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.7■□□□□ 0.9
Gja8P28236 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gja8P28236 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gja8P28236 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gja8P28236 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gja8P28236 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gja8P28236 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gja8P28236 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gja8P28236 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gja8P28236 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gja8P28236 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gja8P28236 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Gja8P28236 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.69■□□□□ 0.9
Gja8P28236 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gja8P28236 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gja8P28236 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gja8P28236 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Gja8P28236 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.68■□□□□ 0.9
Gja8P28236 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gja8P28236 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gja8P28236 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.68■□□□□ 0.9
Gja8P28236 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gja8P28236 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gja8P28236 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.68■□□□□ 0.9
Gja8P28236 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Gja8P28236 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gja8P28236 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gja8P28236 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gja8P28236 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gja8P28236 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gja8P28236 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Gja8P28236 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gja8P28236 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gja8P28236 Gm21814-202ENSMUST00000203277 873 ntBASIC20.67■□□□□ 0.9
Gja8P28236 Gm30025-201ENSMUST00000218555 728 ntBASIC20.67■□□□□ 0.9
Gja8P28236 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.67■□□□□ 0.9
Gja8P28236 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gja8P28236 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gja8P28236 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gja8P28236 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gja8P28236 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gja8P28236 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gja8P28236 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gja8P28236 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gja8P28236 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gja8P28236 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.66■□□□□ 0.9
Gja8P28236 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gja8P28236 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gja8P28236 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gja8P28236 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gja8P28236 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gja8P28236 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gja8P28236 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gja8P28236 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gja8P28236 Gm10517-202ENSMUST00000192970 758 ntBASIC20.65■□□□□ 0.9
Gja8P28236 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gja8P28236 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gja8P28236 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gja8P28236 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.65■□□□□ 0.9
Gja8P28236 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gja8P28236 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gja8P28236 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Gja8P28236 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gja8P28236 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gja8P28236 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Gja8P28236 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gja8P28236 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gja8P28236 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gja8P28236 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gja8P28236 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.64■□□□□ 0.89
Gja8P28236 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.64■□□□□ 0.89
Gja8P28236 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gja8P28236 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Gja8P28236 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.64■□□□□ 0.89
Gja8P28236 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Gja8P28236 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gja8P28236 Iqck-206ENSMUST00000208658 2891 ntBASIC20.64■□□□□ 0.89
Gja8P28236 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms