Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nfkb1P25799 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Nfkb1P25799 Gm13168-201ENSMUST00000121771 632 ntBASIC19.11■□□□□ 0.65
Nfkb1P25799 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nfkb1P25799 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Nfkb1P25799 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.11■□□□□ 0.65
Nfkb1P25799 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nfkb1P25799 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nfkb1P25799 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nfkb1P25799 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Nfkb1P25799 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Nfkb1P25799 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Nfkb1P25799 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nfkb1P25799 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nfkb1P25799 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nfkb1P25799 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nfkb1P25799 Gm27275-201ENSMUST00000184318 272 ntBASIC19.1■□□□□ 0.65
Nfkb1P25799 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.1■□□□□ 0.65
Nfkb1P25799 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.1■□□□□ 0.65
Nfkb1P25799 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nfkb1P25799 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nfkb1P25799 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nfkb1P25799 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nfkb1P25799 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nfkb1P25799 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Nfkb1P25799 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nfkb1P25799 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nfkb1P25799 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nfkb1P25799 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nfkb1P25799 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nfkb1P25799 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nfkb1P25799 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nfkb1P25799 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nfkb1P25799 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.09■□□□□ 0.65
Nfkb1P25799 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nfkb1P25799 Gm12896-201ENSMUST00000118430 226 ntBASIC19.09■□□□□ 0.65
Nfkb1P25799 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.09■□□□□ 0.65
Nfkb1P25799 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.09■□□□□ 0.65
Nfkb1P25799 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nfkb1P25799 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nfkb1P25799 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Nfkb1P25799 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Nfkb1P25799 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nfkb1P25799 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nfkb1P25799 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nfkb1P25799 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.08■□□□□ 0.64
Nfkb1P25799 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.08■□□□□ 0.64
Nfkb1P25799 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Nfkb1P25799 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Nfkb1P25799 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.08■□□□□ 0.64
Nfkb1P25799 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nfkb1P25799 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Nfkb1P25799 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.08■□□□□ 0.64
Nfkb1P25799 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nfkb1P25799 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nfkb1P25799 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Nfkb1P25799 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Nfkb1P25799 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nfkb1P25799 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nfkb1P25799 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nfkb1P25799 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nfkb1P25799 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Nfkb1P25799 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nfkb1P25799 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Nfkb1P25799 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nfkb1P25799 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nfkb1P25799 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.07■□□□□ 0.64
Nfkb1P25799 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nfkb1P25799 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nfkb1P25799 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.06■□□□□ 0.64
Nfkb1P25799 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.06■□□□□ 0.64
Nfkb1P25799 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nfkb1P25799 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nfkb1P25799 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Nfkb1P25799 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nfkb1P25799 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Nfkb1P25799 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nfkb1P25799 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Nfkb1P25799 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nfkb1P25799 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nfkb1P25799 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Nfkb1P25799 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Nfkb1P25799 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nfkb1P25799 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nfkb1P25799 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nfkb1P25799 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Nfkb1P25799 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nfkb1P25799 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nfkb1P25799 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nfkb1P25799 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nfkb1P25799 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nfkb1P25799 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Nfkb1P25799 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nfkb1P25799 Gm2559-201ENSMUST00000201323 363 ntBASIC19.03■□□□□ 0.64
Nfkb1P25799 Gm44549-201ENSMUST00000208351 577 ntBASIC19.03■□□□□ 0.64
Nfkb1P25799 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nfkb1P25799 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.03■□□□□ 0.64
Nfkb1P25799 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.03■□□□□ 0.64
Nfkb1P25799 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nfkb1P25799 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms