Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.32■□□□□ 0.68
Hoxd8P23463 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.32■□□□□ 0.68
Hoxd8P23463 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxd8P23463 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Hoxd8P23463 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.32■□□□□ 0.68
Hoxd8P23463 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.32■□□□□ 0.68
Hoxd8P23463 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxd8P23463 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxd8P23463 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxd8P23463 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.32■□□□□ 0.68
Hoxd8P23463 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxd8P23463 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxd8P23463 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxd8P23463 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxd8P23463 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxd8P23463 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxd8P23463 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxd8P23463 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.31■□□□□ 0.68
Hoxd8P23463 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.31■□□□□ 0.68
Hoxd8P23463 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxd8P23463 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxd8P23463 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxd8P23463 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxd8P23463 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.31■□□□□ 0.68
Hoxd8P23463 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.3■□□□□ 0.68
Hoxd8P23463 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxd8P23463 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxd8P23463 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxd8P23463 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Hoxd8P23463 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.3■□□□□ 0.68
Hoxd8P23463 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.3■□□□□ 0.68
Hoxd8P23463 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxd8P23463 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxd8P23463 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxd8P23463 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxd8P23463 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxd8P23463 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxd8P23463 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxd8P23463 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxd8P23463 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxd8P23463 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxd8P23463 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Hoxd8P23463 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxd8P23463 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.29■□□□□ 0.68
Hoxd8P23463 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxd8P23463 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxd8P23463 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxd8P23463 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxd8P23463 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxd8P23463 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxd8P23463 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxd8P23463 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxd8P23463 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.28■□□□□ 0.68
Hoxd8P23463 Gm13836-201ENSMUST00000121159 501 ntBASIC19.28■□□□□ 0.68
Hoxd8P23463 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxd8P23463 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.28■□□□□ 0.68
Hoxd8P23463 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.28■□□□□ 0.68
Hoxd8P23463 Gm38285-201ENSMUST00000192928 922 ntBASIC19.28■□□□□ 0.68
Hoxd8P23463 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxd8P23463 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxd8P23463 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Hoxd8P23463 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxd8P23463 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxd8P23463 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Hoxd8P23463 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxd8P23463 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxd8P23463 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxd8P23463 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxd8P23463 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.27■□□□□ 0.68
Hoxd8P23463 Gm10138-203ENSMUST00000206952 366 ntBASIC19.27■□□□□ 0.68
Hoxd8P23463 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Hoxd8P23463 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.27■□□□□ 0.68
Hoxd8P23463 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.27■□□□□ 0.68
Hoxd8P23463 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Hoxd8P23463 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxd8P23463 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hoxd8P23463 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.26■□□□□ 0.67
Hoxd8P23463 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxd8P23463 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxd8P23463 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.26■□□□□ 0.67
Hoxd8P23463 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.26■□□□□ 0.67
Hoxd8P23463 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxd8P23463 Mtag2-201ENSMUST00000058665 714 ntBASIC19.26■□□□□ 0.67
Hoxd8P23463 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxd8P23463 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Hoxd8P23463 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxd8P23463 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxd8P23463 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxd8P23463 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxd8P23463 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.25■□□□□ 0.67
Hoxd8P23463 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxd8P23463 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxd8P23463 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxd8P23463 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxd8P23463 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.25■□□□□ 0.67
Hoxd8P23463 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxd8P23463 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Hoxd8P23463 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Hoxd8P23463 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxd8P23463 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms