Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pde6bP23440 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Pde6bP23440 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pde6bP23440 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pde6bP23440 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pde6bP23440 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Pde6bP23440 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pde6bP23440 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pde6bP23440 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pde6bP23440 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Pde6bP23440 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pde6bP23440 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6bP23440 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6bP23440 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6bP23440 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6bP23440 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6bP23440 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.2■□□□□ 0.82
Pde6bP23440 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6bP23440 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6bP23440 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6bP23440 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6bP23440 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6bP23440 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6bP23440 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6bP23440 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6bP23440 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6bP23440 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6bP23440 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6bP23440 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6bP23440 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.19■□□□□ 0.82
Pde6bP23440 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6bP23440 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pde6bP23440 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6bP23440 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6bP23440 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pde6bP23440 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6bP23440 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6bP23440 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.18■□□□□ 0.82
Pde6bP23440 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pde6bP23440 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6bP23440 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Pde6bP23440 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6bP23440 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6bP23440 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6bP23440 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6bP23440 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6bP23440 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6bP23440 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.18■□□□□ 0.82
Pde6bP23440 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pde6bP23440 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pde6bP23440 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pde6bP23440 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pde6bP23440 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pde6bP23440 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pde6bP23440 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pde6bP23440 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Pde6bP23440 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6bP23440 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6bP23440 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6bP23440 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6bP23440 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.16■□□□□ 0.82
Pde6bP23440 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6bP23440 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6bP23440 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6bP23440 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6bP23440 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.16■□□□□ 0.82
Pde6bP23440 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6bP23440 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.16■□□□□ 0.82
Pde6bP23440 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6bP23440 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.15■□□□□ 0.82
Pde6bP23440 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.15■□□□□ 0.82
Pde6bP23440 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.15■□□□□ 0.82
Pde6bP23440 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.15■□□□□ 0.82
Pde6bP23440 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6bP23440 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6bP23440 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6bP23440 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pde6bP23440 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pde6bP23440 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.14■□□□□ 0.81
Pde6bP23440 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.14■□□□□ 0.81
Pde6bP23440 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.14■□□□□ 0.81
Pde6bP23440 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pde6bP23440 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pde6bP23440 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.14■□□□□ 0.81
Pde6bP23440 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pde6bP23440 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Pde6bP23440 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pde6bP23440 Gm5643-201ENSMUST00000117081 966 ntBASIC20.13■□□□□ 0.81
Pde6bP23440 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pde6bP23440 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pde6bP23440 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pde6bP23440 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pde6bP23440 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pde6bP23440 Dio3-201ENSMUST00000097228 1449 ntBASIC20.12■□□□□ 0.81
Pde6bP23440 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pde6bP23440 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pde6bP23440 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pde6bP23440 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.12■□□□□ 0.81
Pde6bP23440 Gm44549-201ENSMUST00000208351 577 ntBASIC20.12■□□□□ 0.81
Pde6bP23440 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms