Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srp54P14576 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Srp54P14576 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srp54P14576 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srp54P14576 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Srp54P14576 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Srp54P14576 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.24■□□□□ 0.51
Srp54P14576 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srp54P14576 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srp54P14576 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Srp54P14576 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Srp54P14576 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.24■□□□□ 0.51
Srp54P14576 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Srp54P14576 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.24■□□□□ 0.51
Srp54P14576 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Srp54P14576 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Srp54P14576 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srp54P14576 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.24■□□□□ 0.51
Srp54P14576 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srp54P14576 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Srp54P14576 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srp54P14576 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srp54P14576 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Srp54P14576 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Srp54P14576 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Srp54P14576 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srp54P14576 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srp54P14576 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Srp54P14576 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Srp54P14576 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srp54P14576 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.23■□□□□ 0.51
Srp54P14576 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Srp54P14576 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.23■□□□□ 0.51
Srp54P14576 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.23■□□□□ 0.51
Srp54P14576 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Srp54P14576 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srp54P14576 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Srp54P14576 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srp54P14576 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
Srp54P14576 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srp54P14576 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Srp54P14576 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Srp54P14576 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srp54P14576 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Srp54P14576 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.22■□□□□ 0.51
Srp54P14576 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Srp54P14576 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Srp54P14576 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srp54P14576 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srp54P14576 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.21■□□□□ 0.51
Srp54P14576 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
Srp54P14576 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.21■□□□□ 0.51
Srp54P14576 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.21■□□□□ 0.51
Srp54P14576 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srp54P14576 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srp54P14576 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srp54P14576 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srp54P14576 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srp54P14576 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Srp54P14576 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srp54P14576 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
Srp54P14576 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srp54P14576 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srp54P14576 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Srp54P14576 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Srp54P14576 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srp54P14576 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.2■□□□□ 0.5
Srp54P14576 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srp54P14576 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srp54P14576 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Srp54P14576 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.19■□□□□ 0.5
Srp54P14576 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srp54P14576 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Srp54P14576 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srp54P14576 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Srp54P14576 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srp54P14576 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srp54P14576 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srp54P14576 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srp54P14576 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Srp54P14576 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Srp54P14576 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Srp54P14576 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Srp54P14576 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srp54P14576 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srp54P14576 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Srp54P14576 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Srp54P14576 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Srp54P14576 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.18■□□□□ 0.5
Srp54P14576 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.18■□□□□ 0.5
Srp54P14576 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Srp54P14576 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srp54P14576 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srp54P14576 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srp54P14576 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srp54P14576 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Srp54P14576 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Srp54P14576 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srp54P14576 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srp54P14576 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms