Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col1a1P11087 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.95■■□□□ 1.1
Col1a1P11087 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Col1a1P11087 Gm15375-201ENSMUST00000119510 849 ntBASIC21.95■■□□□ 1.1
Col1a1P11087 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.95■■□□□ 1.1
Col1a1P11087 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.95■■□□□ 1.1
Col1a1P11087 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Col1a1P11087 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Col1a1P11087 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col1a1P11087 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col1a1P11087 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col1a1P11087 Mtag2-201ENSMUST00000058665 714 ntBASIC21.94■■□□□ 1.1
Col1a1P11087 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col1a1P11087 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.94■■□□□ 1.1
Col1a1P11087 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col1a1P11087 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col1a1P11087 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col1a1P11087 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col1a1P11087 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col1a1P11087 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
Col1a1P11087 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.93■■□□□ 1.1
Col1a1P11087 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col1a1P11087 Gm3375-201ENSMUST00000203929 796 ntBASIC21.93■■□□□ 1.1
Col1a1P11087 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Col1a1P11087 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col1a1P11087 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col1a1P11087 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col1a1P11087 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col1a1P11087 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.92■■□□□ 1.1
Col1a1P11087 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Col1a1P11087 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.92■■□□□ 1.1
Col1a1P11087 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.92■■□□□ 1.1
Col1a1P11087 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.92■■□□□ 1.1
Col1a1P11087 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.92■■□□□ 1.1
Col1a1P11087 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.92■■□□□ 1.1
Col1a1P11087 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Col1a1P11087 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.92■■□□□ 1.1
Col1a1P11087 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Col1a1P11087 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col1a1P11087 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col1a1P11087 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col1a1P11087 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col1a1P11087 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.91■■□□□ 1.1
Col1a1P11087 Gm11539-201ENSMUST00000119837 557 ntBASIC21.91■■□□□ 1.1
Col1a1P11087 Gm13436-201ENSMUST00000120418 567 ntBASIC21.91■■□□□ 1.1
Col1a1P11087 Gm7889-201ENSMUST00000185591 958 ntBASIC21.91■■□□□ 1.1
Col1a1P11087 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.91■■□□□ 1.1
Col1a1P11087 Timm23-208ENSMUST00000226683 750 ntBASIC21.91■■□□□ 1.1
Col1a1P11087 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.91■■□□□ 1.1
Col1a1P11087 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Col1a1P11087 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Col1a1P11087 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col1a1P11087 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col1a1P11087 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Col1a1P11087 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.9■■□□□ 1.1
Col1a1P11087 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Col1a1P11087 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col1a1P11087 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.9■■□□□ 1.1
Col1a1P11087 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col1a1P11087 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col1a1P11087 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Col1a1P11087 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Col1a1P11087 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.9■■□□□ 1.1
Col1a1P11087 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col1a1P11087 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Col1a1P11087 Gm10819-201ENSMUST00000099988 561 ntBASIC21.9■■□□□ 1.1
Col1a1P11087 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Col1a1P11087 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col1a1P11087 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col1a1P11087 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col1a1P11087 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.89■■□□□ 1.09
Col1a1P11087 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.89■■□□□ 1.09
Col1a1P11087 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col1a1P11087 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col1a1P11087 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col1a1P11087 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col1a1P11087 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Col1a1P11087 Gm21362-201ENSMUST00000194272 928 ntBASIC21.88■■□□□ 1.09
Col1a1P11087 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.88■■□□□ 1.09
Col1a1P11087 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col1a1P11087 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Col1a1P11087 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Col1a1P11087 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col1a1P11087 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col1a1P11087 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col1a1P11087 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col1a1P11087 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col1a1P11087 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col1a1P11087 Gm6659-201ENSMUST00000174752 547 ntBASIC21.87■■□□□ 1.09
Col1a1P11087 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col1a1P11087 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col1a1P11087 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col1a1P11087 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col1a1P11087 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Col1a1P11087 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.86■■□□□ 1.09
Col1a1P11087 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col1a1P11087 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.86■■□□□ 1.09
Col1a1P11087 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col1a1P11087 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col1a1P11087 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms