Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sod1P08228 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sod1P08228 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.61■□□□□ 0.41
Sod1P08228 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sod1P08228 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sod1P08228 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sod1P08228 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sod1P08228 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.6■□□□□ 0.41
Sod1P08228 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sod1P08228 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Sod1P08228 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sod1P08228 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sod1P08228 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.6■□□□□ 0.41
Sod1P08228 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sod1P08228 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Sod1P08228 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sod1P08228 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sod1P08228 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sod1P08228 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sod1P08228 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.59■□□□□ 0.41
Sod1P08228 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sod1P08228 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sod1P08228 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sod1P08228 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Sod1P08228 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Sod1P08228 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sod1P08228 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sod1P08228 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Sod1P08228 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sod1P08228 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sod1P08228 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sod1P08228 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sod1P08228 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sod1P08228 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Sod1P08228 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sod1P08228 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sod1P08228 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sod1P08228 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sod1P08228 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sod1P08228 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sod1P08228 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Sod1P08228 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sod1P08228 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sod1P08228 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sod1P08228 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sod1P08228 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sod1P08228 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sod1P08228 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sod1P08228 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sod1P08228 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sod1P08228 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sod1P08228 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sod1P08228 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.57■□□□□ 0.4
Sod1P08228 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sod1P08228 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Sod1P08228 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.57■□□□□ 0.4
Sod1P08228 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sod1P08228 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sod1P08228 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sod1P08228 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sod1P08228 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sod1P08228 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sod1P08228 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Sod1P08228 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sod1P08228 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sod1P08228 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.56■□□□□ 0.4
Sod1P08228 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.56■□□□□ 0.4
Sod1P08228 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sod1P08228 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.56■□□□□ 0.4
Sod1P08228 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sod1P08228 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sod1P08228 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sod1P08228 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.56■□□□□ 0.4
Sod1P08228 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sod1P08228 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sod1P08228 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sod1P08228 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sod1P08228 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sod1P08228 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sod1P08228 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sod1P08228 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sod1P08228 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sod1P08228 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sod1P08228 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sod1P08228 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sod1P08228 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sod1P08228 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.55■□□□□ 0.4
Sod1P08228 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sod1P08228 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sod1P08228 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sod1P08228 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sod1P08228 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sod1P08228 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Sod1P08228 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sod1P08228 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sod1P08228 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sod1P08228 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Sod1P08228 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.54■□□□□ 0.4
Sod1P08228 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sod1P08228 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms