Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxa4P06798 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Hoxa4P06798 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Hoxa4P06798 Rab3c-203ENSMUST00000224180 967 ntBASIC18.34■□□□□ 0.53
Hoxa4P06798 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.34■□□□□ 0.53
Hoxa4P06798 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Hoxa4P06798 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Hoxa4P06798 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxa4P06798 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxa4P06798 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxa4P06798 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxa4P06798 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxa4P06798 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxa4P06798 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxa4P06798 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxa4P06798 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.33■□□□□ 0.53
Hoxa4P06798 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Hoxa4P06798 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.33■□□□□ 0.52
Hoxa4P06798 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.33■□□□□ 0.52
Hoxa4P06798 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxa4P06798 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Hoxa4P06798 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.33■□□□□ 0.52
Hoxa4P06798 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxa4P06798 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxa4P06798 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa4P06798 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.32■□□□□ 0.52
Hoxa4P06798 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa4P06798 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa4P06798 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa4P06798 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa4P06798 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.32■□□□□ 0.52
Hoxa4P06798 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa4P06798 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa4P06798 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Hoxa4P06798 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa4P06798 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa4P06798 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa4P06798 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.32■□□□□ 0.52
Hoxa4P06798 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.32■□□□□ 0.52
Hoxa4P06798 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.32■□□□□ 0.52
Hoxa4P06798 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Hoxa4P06798 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.32■□□□□ 0.52
Hoxa4P06798 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa4P06798 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa4P06798 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa4P06798 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa4P06798 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa4P06798 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa4P06798 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.32■□□□□ 0.52
Hoxa4P06798 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Hoxa4P06798 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Hoxa4P06798 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxa4P06798 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.31■□□□□ 0.52
Hoxa4P06798 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.31■□□□□ 0.52
Hoxa4P06798 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.31■□□□□ 0.52
Hoxa4P06798 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxa4P06798 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxa4P06798 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxa4P06798 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Hoxa4P06798 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxa4P06798 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxa4P06798 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxa4P06798 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxa4P06798 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxa4P06798 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxa4P06798 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.3■□□□□ 0.52
Hoxa4P06798 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxa4P06798 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxa4P06798 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxa4P06798 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxa4P06798 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Hoxa4P06798 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxa4P06798 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Hoxa4P06798 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxa4P06798 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxa4P06798 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxa4P06798 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxa4P06798 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Hoxa4P06798 Gm12441-201ENSMUST00000121806 588 ntBASIC18.29■□□□□ 0.52
Hoxa4P06798 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.29■□□□□ 0.52
Hoxa4P06798 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.29■□□□□ 0.52
Hoxa4P06798 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxa4P06798 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxa4P06798 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.29■□□□□ 0.52
Hoxa4P06798 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxa4P06798 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxa4P06798 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.28■□□□□ 0.52
Hoxa4P06798 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxa4P06798 Gm5408-201ENSMUST00000197998 747 ntBASIC18.28■□□□□ 0.52
Hoxa4P06798 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Hoxa4P06798 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Hoxa4P06798 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxa4P06798 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.28■□□□□ 0.52
Hoxa4P06798 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxa4P06798 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Hoxa4P06798 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxa4P06798 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxa4P06798 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxa4P06798 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxa4P06798 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms